Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01755 ATGGCATTGGATAACCATTCACCTTCTCTCGAGATATTAGTTCGAAGGCCTGAAGAATTATCATTATGGACTGGACCTCCATTCCCAAATGGTCAACCTAATGTCAAACTTGATAAAGTTAATTGCTCGAATGCAAAATTTAGTGATAATGGATCTTTGCTTATGGTGGTCAAATCTAATTCTGTCATTAGTATTTATGATTGTAAGAGTGCTAAAGAGATTAGGTCTTTTGAAGTTCCTAATCTTGTGGCTTCTATTTTGTCACCTTGTGGAACTTATTTGCAAACCTTTCAAAAACCTGCCGGCCCGCAAGATAAGAATGTCACATTATGGAAAACGGAGACCGGTGATATTGCTTATCAACATTCTCAAAAGAATCTGACAAAAACCAATTGGCCTTCAATTCAATTCAGCTCCGATGAAGCTACTGCGTGCCGTGTAGCAACTAATGAGGTGCAGTTTTTCGATGCTGGGGATTTTTCTAAAGGATTTATTTGTCGGTTAAGAGTTCCAGGAGTTACTTCTGCCGAGCTTTCTAGTTCACCTGCTTCTCATGTAGCTGCATTTGTTCCAGAATCCAAGGGTGTTCCTGCTAGTGTACAAATATTTGCTTGTGAAAATGCTTCCCAAGGTCAACCTGTGGCTCGACGGAGCTTTTTCCGATGTTCTACCACCCAACTTAAATGGAATCATGGTTCAACTGGACTTCTAATTCTGGTGCAGTCTGATGTTGATAAAACCAATCAGAGTTACTATGGAGAATCAAAGTTATACTACCTGACAACAGATGGGGTGCATGAAGGATTAGTTCCTCTTCGGAAAGAGGGGCCTATTCATGATGCTCAGTGGTCATATTCAGGCTTAGAATTTGCTGTTGTGTATGGGTTTATGCCTGCTAAAGCAACTCTGTTTGACAAGAAGTGCAATCCTCTACTGGAGCTTGGAACTGGTCCTTACAACACTATTCGATGGAACCCGAAAGGGAAATTTTTATGTTTGGCTGGCTTCGGTAACTTGCCTGGTGATATGGTATTTTGGGATTACATAGAAAAGAAACAGCTTGCAGCAACCAAGGCTGAATGGTCCGTGACAAGTGAATGGTCTCCAGATGGGTGCTATTTCATGACAGCGACAACAGCTCCAAGGCTTCAAGTTGACAATGGGATCAAGATTTTTCACTATAATGGGTCATTGTACTTCAAGAAGATGTTTGACAAATTGTACCAGGCTGATTGGAAACCAGAGTCACCAAGTAAGTTTGGTGACATCACTGAATTAATCAAGTCTCTAGACTCGGTAAAACTTGAAGATAAAAAACCATCAGGTCAAGGACCAAAACCAACCCAGGCATCTACAAAAGCCCCTTCTGCCAACCCAACTGCACAAAAACCTGCCGCATATCGTCCACCACATGCTAAGACTGCGGCTGTTATTCAGGCACAGTTGTTAGGAGAGAGCTCGGCAGAATCATTGAGCAAGAATGCTTTGCGAAACAAGAAAAAGAGGGAGAAACAGAAGGAGAAAAAGGCTGCTGCAGATGCCAGTTCGTGA 1551 0.4197 MALDNHSPSLEILVRRPEELSLWTGPPFPNGQPNVKLDKVNCSNAKFSDNGSLLMVVKSNSVISIYDCKSAKEIRSFEVPNLVASILSPCGTYLQTFQKPAGPQDKNVTLWKTETGDIAYQHSQKNLTKTNWPSIQFSSDEATACRVATNEVQFFDAGDFSKGFICRLRVPGVTSAELSSSPASHVAAFVPESKGVPASVQIFACENASQGQPVARRSFFRCSTTQLKWNHGSTGLLILVQSDVDKTNQSYYGESKLYYLTTDGVHEGLVPLRKEGPIHDAQWSYSGLEFAVVYGFMPAKATLFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYIEKKQLAATKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLYQADWKPESPSKFGDITELIKSLDSVKLEDKKPSGQGPKPTQASTKAPSANPTAQKPAAYRPPHAKTAAVIQAQLLGESSAESLSKNALRNKKKREKQKEKKAAADASS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01755 516 MobiDBLite consensus disorder prediction 434 474 - -
Trre7g01755 516 Gene3D - 38 418 IPR015943 GO:0005515
Trre7g01755 516 FunFam Eukaryotic translation initiation factor 2A 30 185 - -
Trre7g01755 516 PIRSF Transl_init_eIF2A 5 516 IPR011387 GO:0003743|GO:0006413
Trre7g01755 516 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 10 512 IPR011387 GO:0003743|GO:0006413
Trre7g01755 516 Pfam Eukaryotic translation initiation factor eIF2A 217 410 IPR013979 -
Trre7g01755 516 SUPERFAMILY DPP6 N-terminal domain-like 41 395 - -
Trre7g01755 516 MobiDBLite consensus disorder prediction 444 459 - -
Trre7g01755 516 FunFam Eukaryotic translation initiation factor 2A 199 422 - -
Trre7g01755 516 Coils Coil 493 516 - -
Trre7g01755 516 MobiDBLite consensus disorder prediction 488 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01755 Trre-Chr7 13650480 13655295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01755 87 418 Eukaryotic Initiation Factors Gene Family AT5G27640 24.033 1.25e-20 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01755 K15026 - gmx:100811589 888.256