Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01752 ATGATAGCCAGCTCCTTCAACAATGCTGATTCTATGTTTTCAAATGAAGAAGGGATAGATGTTAGAAAGATGATGGGACATAAAAGGAGCCTTTGTTCTGTTGATCAAAGCAATTATAATTCTATTGCTTCTAAAAAGCAAAAGCCTGATTTATCGATCAGCACTAAGGATAGGAAGGAAAAGCTTGGTGAACGAATTGTTGCTCTTCAACAGCTTGTTTCACCGTATGGAAAGACAGATACATCTTCTGTTCTAAAGGAGGCGATGGACTACATAGAGTTCCTTCATAAACAAGTTAAGCTGCTCAGTGCTCCTTATCTCGAAGCTTCACCACCTACCCAAATGCAGGGTACAGAGTCATGCAGCCTGAGGAGTAGAGGGTTATGTCTTGTTCCTGTCTCATTTACTATTGGAGTTGCTGAGGGCAATGGTGCAGACATCTGGGCACCAATCAAGACCACTTCACCTAAAAATGAGAAAGATGTCTCGCAATCGTAA 498 0.4137 MIASSFNNADSMFSNEEGIDVRKMMGHKRSLCSVDQSNYNSIASKKQKPDLSISTKDRKEKLGERIVALQQLVSPYGKTDTSSVLKEAMDYIEFLHKQVKLLSAPYLEASPPTQMQGTESCSLRSRGLCLVPVSFTIGVAEGNGADIWAPIKTTSPKNEKDVSQS 165
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01752 165 Gene3D - 44 111 IPR036638 GO:0046983
Trre7g01752 165 FunFam Transcription factor bHLH113 family 45 121 - -
Trre7g01752 165 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Trre7g01752 165 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 42 136 - -
Trre7g01752 165 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 53 113 IPR036638 GO:0046983
Trre7g01752 165 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
Trre7g01752 165 SMART finulus 52 101 IPR011598 GO:0046983
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre7g01752 Trre-Chr7 13611402 13615363 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01752 24 165 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 57.042 1.85e-50 157
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01752 - - gmx:100809747 274.248