Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01742 ATGGGAAAGAAAGGGGGTTGGTTTTCAGCAATCAAGAGGGTTTTCACACACCACTCCAAAGGGAAGCAGGATTCAGATAACAAAAGCACAAAAGAGAAGAAGAAAGGTCTTGGAAAAAAGCATGGAGAGACCAATTCTTTCATCCCTATCTTCAGAGAGCCAAGCAGCATTGAAAAAATATTCAGTGACTTCGAAAGAGAGCAACAAGTACTTACAATTAGGCCTCCCACACCTCCCGAGAGACCGAAAACGCCACCTTTTGTCCCTCCTAGAGTTGCTTCTCCTAGGCCTCCTTCTCCAAAGCCTCCTTCTCCAAGGGCTCCATCTCCGAGAGCTGCTTCTCCCCGAGTTACCTCTCCGAAAGCTGCATCCTCCCGGAATGTTCATCAACATAAGGAGGTTCGAAACAGACCAGAACCAACTTTACAAAACCAGAATGCCTCGGCTACTAAGATCCAGGCTGCTTACAGAGGTTATACGGGCCGGAGGAGCTTTAGAGCTCTGAAGGGTTTGGTAAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGACAGACAGTTAGTGCCATGAAACACATGCAGCTGTTAGTGCGAGTTCAATCTCAGATTCAATCTCGACGAATTCAGATGTTGGAAAACCAGGCACGATATCAAGCCGAGTTCAAGAATGATAAGGACGCTGGAAGTACCTTTGGCAAACTGACTTCTGAGGCAGGTAACGGTGAAGATTGGGATGATAGCTTACTGACAAAAGAGGAAGTAGAAGCAAGGTTGCAGAGGAAGGTTGAAGCAATCATCAAAAGAGAGAGAGCAATGGCATTTGCATATTCACATCAGCTGTGGAAGGCGACTCCAAAATCAACTCAAACACAGGCAACAGATATGCGAGCGAGCGGATTCCCATGGTGGTGGAACTGGTTGGAAAGACAACTACCTGCAGTAGCAAATCCACAAGAAAAACAAGTCCTAAAGAATTTTCAGCTCACACCACCAAGACCATATTCAGAACAAAAGACAAGTCCAAGACCTGGCTCAAGCTCTCAAAGGCCTTTTGCCTTTGATAACATGGATACACCAACTCCAAAATCAACAAGATCAACTATATTTCCATCTTCAAAACCATCTAGAACTCCTCCATTTAGAACTCCACAAGGTAACAGTTCAAGCATGATGTCAAAACAGTCAAGGTCAAGAGCAGTAGGATCCAACTCACCTTTCGACGTTCCGCTGAAGGATGATGATAGTCTCATGAGCTGTCCACCGTTTTCGGTTCCAAACTACATGACTCCAACTGTTTCTGCTAAGGCGAAAGTACGTGCTAATAGTAATCCAAGAGAAAGATTTGGTGGTGGTAGTAGTGGTTGTGCAACTCCAACTCCAGGCAATGATTCGAGGAGAAGTTCATTCCCTTTGTCACAAGGTATAAGGTCATTCAAATGGAATAAAGGGTCATTGTTCTCTAGCAATAAGGATCCTCATGGCTCTCAGTCCTCTCATAGGACACCAGATAAATATCAGTCACTTGAATCTATAGGAAATGTGAGTGTGGATTCGACGGTATCGTTGCCGGCAAGGGTTGGAAGAAAGCCTTTTACAAGATTTGTGTGA 1611 0.4488 MGKKGGWFSAIKRVFTHHSKGKQDSDNKSTKEKKKGLGKKHGETNSFIPIFREPSSIEKIFSDFEREQQVLTIRPPTPPERPKTPPFVPPRVASPRPPSPKPPSPRAPSPRAASPRVTSPKAASSRNVHQHKEVRNRPEPTLQNQNASATKIQAAYRGYTGRRSFRALKGLVRLQGVVRGQNVKRQTVSAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKDAGSTFGKLTSEAGNGEDWDDSLLTKEEVEARLQRKVEAIIKRERAMAFAYSHQLWKATPKSTQTQATDMRASGFPWWWNWLERQLPAVANPQEKQVLKNFQLTPPRPYSEQKTSPRPGSSSQRPFAFDNMDTPTPKSTRSTIFPSSKPSRTPPFRTPQGNSSSMMSKQSRSRAVGSNSPFDVPLKDDDSLMSCPPFSVPNYMTPTVSAKAKVRANSNPRERFGGGSSGCATPTPGNDSRRSSFPLSQGIRSFKWNKGSLFSSNKDPHGSQSSHRTPDKYQSLESIGNVSVDSTVSLPARVGRKPFTRFV 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01742 536 MobiDBLite consensus disorder prediction 1 52 - -
Trre7g01742 536 MobiDBLite consensus disorder prediction 483 511 - -
Trre7g01742 536 PANTHER IQ-DOMAIN 5-RELATED 1 473 - -
Trre7g01742 536 MobiDBLite consensus disorder prediction 75 110 - -
Trre7g01742 536 Pfam Protein of unknown function (DUF4005) 397 501 IPR025064 -
Trre7g01742 536 MobiDBLite consensus disorder prediction 227 247 - -
Trre7g01742 536 Gene3D - 125 165 - -
Trre7g01742 536 MobiDBLite consensus disorder prediction 68 149 - -
Trre7g01742 536 ProSiteProfiles IQ motif profile. 145 173 IPR000048 GO:0005515
Trre7g01742 536 MobiDBLite consensus disorder prediction 327 413 - -
Trre7g01742 536 Pfam IQ calmodulin-binding motif 147 166 IPR000048 GO:0005515
Trre7g01742 536 MobiDBLite consensus disorder prediction 327 403 - -
Trre7g01742 536 MobiDBLite consensus disorder prediction 456 471 - -
Trre7g01742 536 MobiDBLite consensus disorder prediction 17 41 - -
Trre7g01742 536 MobiDBLite consensus disorder prediction 436 471 - -
Trre7g01742 536 SMART iq_5 144 166 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01742 Trre-Chr7 13545958 13549044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01742 1 535 IQD Protein Family AT3G59690 53.439 1.11e-167 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01742 - - gmx:100807777 738.413