Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01741 ATGGGAAAGAAAGGGGGTTGGTTTTCAGCAATCAAGAGGGTTTTCACACACCACTCCAAAGGGAAGGATTCAGATAACAAAAGCACAAAAGAGAAGAAGAAAGGTCTTGGAAAAAAGCATGGAGAGACCAATTCTTTCATCCCTATCTTCAGAGAGCCAAGCAGCATTGAAAAAATATTCAGTGACTTCGAAAGAGAGCAACAAGTACTTACAATTAGGCCTCCCACACCTCCCGAGAGACCGAAAACGCCACCTTTTGTCCCTCCTAGAGTTGCTTCTCCTAGGCCTCCTTCTCCAAAGCCTCCTTCTCCAAGGGCTCCATCTCCGAGAGCTGCTTCTCCCCGAGTTACCTCTCCGAAAGCTGCATCCTCCCGGAATGTTCATCAACATAAGGAGGTTCGAAACAGACCAGAACCAACTTTACAAAACCAGAATGCCTCGGCTACTAAGATCCAGGCTGCTTACAGAGGTTATACGGGCCGGAGGAGCTTTAGAGCTCTGAAGGGTTTGGTAAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGACAGACAGTTAGTGCCATGAAACACATGCAGCTGTTAGTGCGAGTTCAATCTCAGATTCAATCTCGACGAATTCAGATGTTGGAAAACCAGGCACGATATCAAGCCGAGTTCAAGAATGATAAGGACGCTGGAAGTACCTTTGGCAAACTGACTTCTGAGGCAGGTAACGGTGAAGATTGGGATGATAGCTTACTGACAAAAGAGGAAGTAGAAGCAAGGTTGCAGAGGAAGGTTGAAGCAATCATCAAAAGAGAGAGAGCAATGGCATTTGCATATTCACATCAGCTGTGGAAGGCGACTCCAAAATCAACTCAAACACAGGCAACAGATATGCGAGCGAGCGGATTCCCATGGTGGTGGAACTGGTTGGAAAGACAACTACCTGCAGTAGCAAATCCACAAGAAAAACAAGTCCTAAAGAATTTTCAGCTCACACCACCAAGACCATATTCAGAACAAAAGACAAGTCCAAGACCTGGCTCAAGCTCTCAAAGGCCTTTTGCCTTTGATAACATGGATACACCAACTCCAAAATCAACAAGATCAACTATATTTCCATCTTCAAAACCATCTAGAACTCCTCCATTTAGAACTCCACAAGGTAACAGTTCAAGCATGATGTCAAAACAGTCAAGGTCAAGAGCAGTAGGATCCAACTCACCTTTCGACGTTCCGCTGAAGGATGATGATAGTCTCATGAGCTGTCCACCGTTTTCGGTTCCAAACTACATGACTCCAACTGTTTCTGCTAAGGCGAAAGTACGTGCTAATAGTAATCCAAGAGAAAGATTTGGTGGTGGTAGTAGTGGTTGTGCAACTCCAACTCCAGGCAATGATTCGAGGAGAAGTTCATTCCCTTTGTCACAAGGTATAAGGTCATTCAAATGGAATAAAGGGTCATTGTTCTCTAGCAATAAGGATCCTCATGGCTCTCAGTCCTCTCATAGGACACCAGATAAATATCAGTCACTTGAATCTATAGGAAATGTGAGTGTGGATTCGACGGTATCGTTGCCGGCAAGGGTTGGAAGAAAGCCTTTTACAAGATTTGTGTGA 1608 0.4484 MGKKGGWFSAIKRVFTHHSKGKDSDNKSTKEKKKGLGKKHGETNSFIPIFREPSSIEKIFSDFEREQQVLTIRPPTPPERPKTPPFVPPRVASPRPPSPKPPSPRAPSPRAASPRVTSPKAASSRNVHQHKEVRNRPEPTLQNQNASATKIQAAYRGYTGRRSFRALKGLVRLQGVVRGQNVKRQTVSAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKDAGSTFGKLTSEAGNGEDWDDSLLTKEEVEARLQRKVEAIIKRERAMAFAYSHQLWKATPKSTQTQATDMRASGFPWWWNWLERQLPAVANPQEKQVLKNFQLTPPRPYSEQKTSPRPGSSSQRPFAFDNMDTPTPKSTRSTIFPSSKPSRTPPFRTPQGNSSSMMSKQSRSRAVGSNSPFDVPLKDDDSLMSCPPFSVPNYMTPTVSAKAKVRANSNPRERFGGGSSGCATPTPGNDSRRSSFPLSQGIRSFKWNKGSLFSSNKDPHGSQSSHRTPDKYQSLESIGNVSVDSTVSLPARVGRKPFTRFV 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01741 535 Pfam IQ calmodulin-binding motif 146 165 IPR000048 GO:0005515
Trre7g01741 535 SMART iq_5 143 165 IPR000048 GO:0005515
Trre7g01741 535 ProSiteProfiles IQ motif profile. 144 172 IPR000048 GO:0005515
Trre7g01741 535 PANTHER IQ-DOMAIN 5-RELATED 1 472 - -
Trre7g01741 535 MobiDBLite consensus disorder prediction 482 510 - -
Trre7g01741 535 MobiDBLite consensus disorder prediction 67 148 - -
Trre7g01741 535 Pfam Protein of unknown function (DUF4005) 396 500 IPR025064 -
Trre7g01741 535 MobiDBLite consensus disorder prediction 1 51 - -
Trre7g01741 535 MobiDBLite consensus disorder prediction 326 412 - -
Trre7g01741 535 MobiDBLite consensus disorder prediction 326 402 - -
Trre7g01741 535 MobiDBLite consensus disorder prediction 455 470 - -
Trre7g01741 535 MobiDBLite consensus disorder prediction 16 40 - -
Trre7g01741 535 MobiDBLite consensus disorder prediction 435 470 - -
Trre7g01741 535 MobiDBLite consensus disorder prediction 226 246 - -
Trre7g01741 535 Gene3D - 124 164 - -
Trre7g01741 535 MobiDBLite consensus disorder prediction 74 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01741 Trre-Chr7 13545958 13549044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01741 1 534 IQD Protein Family AT3G59690 52.910 9.48e-166 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01741 - - gmx:100807777 739.569