Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01728 ATGTCTTCCTCTTCACCACCACAATCTCTTACTCCACCTTTCTTTCCAACTTACCAGTCACCACCACAACCTCCTTCACCACCTTTCCTCGCCACTTTCCCAGCTAACATCTCTTCCTTACTCCTTCCAACACCTCATACTAAAACCCATAACCACCGTTCCGCCGCCGTTCTCCTCATCTCCCTCTCTCTTTTCTCCATCCTCCTCCTCACCTTATCTGCTTTCTTTTCCTACCACCGTCGTCATCACAACCACAAAACTTCCTCCACCACTGCAAACGACGATACTGCTTCAAGATCAGATAGTCTCCGTTTATTCCCACCGAACACCGCCACTTCTGACTCCGTCGACAGTAAACCATCATCTGGGTCGGAGATATTCCACCTCGGAACCATATCAAGCTCAGAAAACATAAAAGTTACTGCAGAATCAAGCTGTAACGGCAATGCCGGTTTCTCTCCGTCGTACCGGCATCTTACAGACTCACCGGAGCTTCGTCCTTTACCTCCTCTACCACGTCACAATGTCAGAACATCGAAGAATCAACAAAAGAAAGAAGAACACATAGCAAGAGAAGATGAAGAGCAGTTTCATTCACCGAAAGCTTCTCCTTCTTCTTCACCAGTGGTTTCTGTTTCTGTTTCTGCTGCTGCTGCTGCAACAAGAACATCTTCATACCCTTTTTCACGTTCACCTTCTCTCAATCTTAGTCCTATTGAAAGTACCAATTCTTTTCCACCTCAGAACTCTGCATCTCCAAGTTTTTCTGCTTCCTCTTCACCTATGGAGAGGGAAGATTTGGATGGTAAGAATGTTCAAGTGAGCAAACTTTCTGCTCCTGCTCCGCCGCCTCTGCCACCGAGGTTAGTGGCTTCTCAAGATGTTAATGTTGATGTTAGGATTGAAAATGAGGAAAGTTCAAAGCCAAAGTTAAAGGCTTTACATTGGGATAAAGTTAAGGCCAGCTCAGATAGGGCCATGGTTTGGGATCACTTGAGACCAAGTTCATTTCAGTTGAATGAAGACATGATTGAGTCACTTTTTATGGTAAATAATTCCAATTCCAATGGAAATTCTGCTTTGGCTGCTAAAGATAATGCTCGGAGCCAAATAACCAATGCTGCTCCAATGCCGCCGGAAAATAGGGTGCTTGATCCTAAGAAGTCTCAGAACATTGCTATTTTGCTTCGAGCGCTGAATGTAACTATTGATGAAGTTTGTGAATCCCTCCGGGAAGGCAATTGTGATACACTGGGAACAGAACTTCTAGAAAGTTTATTAAAGATGGCCCCAACTAAAGAGGAAGAATCTAAGCTGAAGGAGTTTAAAGATGAATCGCCCTTCAAGCTAGGCCCGGCTGAGAAATTTCTTAAAGTCATGCTTGATATACCTTTTGCATTCAAAAGAATGGATGCTATGCTCTACATTGCTAATTTTGATTCAGAATTAGAATACCTGAAGAAATCCTTTGATACTCTGGAGGTGGCTTGTGAGGAATTAAAGAATAGTAGAATGTTTATGAAGATACTAGAGGCAGTTCTTAGAACAGGAAATCGAATGAATGTTGGCACCGATCGTGGTGACGCACAGGCATTCAAACTGGACACACTTTTGAAGTTGGTTGATATTAAGGGAACTGACAGAAAGACTACTCTTTTACATTTCGTTGTACAAGAAATTGTCAGAACCGAGGGTTCTCATGTATCTGGTGCTGACCATCACAATGTTGACTCCTTCAACAATCATCAGTGTACTCTTCAAGATGAGGTTGACTCGAGGAAGCTTGGACTGCAAGTTGTATCAGGTTTGAGTGGAGAACTCACTAATGTTAAAAAGGTAGCTTTTATGGATTCAGACACGCTGAGTAGCGATGTTGCTAAACTTGCCAAAGGAATCGAAAAGGTGTTGCTAGTTGTAAAATTGAATGAAGAGTCACCTTTGAAAGAAACCAACCAAAAATTTTCCGAGGCTATGAAAGGTTTCTTGGAGAGGGGTCAGGAAGAGATTTTAAGGATCCAGGCGCAAGAGAAAAGTGCCATCTCTTCAGTGAAGGAGGTAACTGAGTATTTCCATGGTAATTCGGCAAAGGAAGAAGCTCATCCGTTTAGGATATTTATGGTTGTGAGGGATTTCCTTTCGATACTAGATGGCGTATGCAAGCAAGTTGGTAAAGCAAATGAGAGGACTTTAGTTGGTTCGCGGCTAGATGTAATGCCTTCAATCACTACACTGCCATCAATTTTCCCCGAGTTTAATGGTAAGCAACCATCTGGCGATTCCTCAGAATCTGATTAG 2295 0.4292 MSSSSPPQSLTPPFFPTYQSPPQPPSPPFLATFPANISSLLLPTPHTKTHNHRSAAVLLISLSLFSILLLTLSAFFSYHRRHHNHKTSSTTANDDTASRSDSLRLFPPNTATSDSVDSKPSSGSEIFHLGTISSSENIKVTAESSCNGNAGFSPSYRHLTDSPELRPLPPLPRHNVRTSKNQQKKEEHIAREDEEQFHSPKASPSSSPVVSVSVSAAAAATRTSSYPFSRSPSLNLSPIESTNSFPPQNSASPSFSASSSPMEREDLDGKNVQVSKLSAPAPPPLPPRLVASQDVNVDVRIENEESSKPKLKALHWDKVKASSDRAMVWDHLRPSSFQLNEDMIESLFMVNNSNSNGNSALAAKDNARSQITNAAPMPPENRVLDPKKSQNIAILLRALNVTIDEVCESLREGNCDTLGTELLESLLKMAPTKEEESKLKEFKDESPFKLGPAEKFLKVMLDIPFAFKRMDAMLYIANFDSELEYLKKSFDTLEVACEELKNSRMFMKILEAVLRTGNRMNVGTDRGDAQAFKLDTLLKLVDIKGTDRKTTLLHFVVQEIVRTEGSHVSGADHHNVDSFNNHQCTLQDEVDSRKLGLQVVSGLSGELTNVKKVAFMDSDTLSSDVAKLAKGIEKVLLVVKLNEESPLKETNQKFSEAMKGFLERGQEEILRIQAQEKSAISSVKEVTEYFHGNSAKEEAHPFRIFMVVRDFLSILDGVCKQVGKANERTLVGSRLDVMPSITTLPSIFPEFNGKQPSGDSSESD 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01728 764 ProSiteProfiles Formin homology-2 (FH2) domain profile. 301 741 IPR015425 -
Trre7g01728 764 SMART it6_source 301 730 IPR015425 -
Trre7g01728 764 MobiDBLite consensus disorder prediction 239 261 - -
Trre7g01728 764 MobiDBLite consensus disorder prediction 1 29 - -
Trre7g01728 764 MobiDBLite consensus disorder prediction 179 199 - -
Trre7g01728 764 MobiDBLite consensus disorder prediction 9 29 - -
Trre7g01728 764 SUPERFAMILY Formin homology 2 domain (FH2 domain) 280 728 - -
Trre7g01728 764 Gene3D Formin, FH2 domain 310 732 IPR042201 -
Trre7g01728 764 MobiDBLite consensus disorder prediction 90 123 - -
Trre7g01728 764 MobiDBLite consensus disorder prediction 153 209 - -
Trre7g01728 764 PANTHER FORMIN-RELATED 22 752 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trre7g01728 764 MobiDBLite consensus disorder prediction 239 270 - -
Trre7g01728 764 MobiDBLite consensus disorder prediction 83 123 - -
Trre7g01728 764 Pfam Formin Homology 2 Domain 303 715 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01728 Trre-Chr7 13431441 13434685 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01728 304 755 FH2 protein (formin) Gene Family AT3G25500 64.912 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01728 - - vun:114175163 876.7