Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01727 ATGTCTAAAATCATCATAACCACACTCTTCCTCTTTTTGTTCTCATCAACTGTTTCTTCTTCTTTCTACCACCGCCGTATCCTCCACCAACCACTTTTTCCATCTATCTCTCTTCCACCAACACAACCACCATCTTCATCACCACAAACACAACCAAAACAACAACAACCAAAGCTTCCATTTTCTTCCATGTCTTCCTCTTCACCACCACAATCTCTTACTCCACCTTTCTTTCCAACTTACCAGTCACCACCACAACCTCCTTCACCACCTTTCCTCGCCACTTTCCCAGCTAACATCTCTTCCTTACTCCTTCCAACACCTCATACTAAAACCCATAACCACCGTTCCGCCGCCGTTCTCCTCATCTCCCTCTCTCTTTTCTCCATCCTCCTCCTCACCTTATCTGCTTTCTTTTCCTACCACCGTCGTCATCACAACCACAAAACTTCCTCCACCACTGCAAACGACGATACTGCTTCAAGATCAGATAGTCTCCGTTTATTCCCACCGAACACCGCCACTTCTGACTCCGTCGACAGTAAACCATCATCTGGGTCGGAGATATTCCACCTCGGAACCATATCAAGCTCAGAAAACATAAAAGTTACTGCAGAATCAAGCTGTAACGGCAATGCCGGTTTCTCTCCGTCGTACCGGCATCTTACAGACTCACCGGAGCTTCGTCCTTTACCTCCTCTACCACGTCACAATGTCAGAACATCGAAGAATCAACAAAAGAAAGAAGAACACATAGCAAGAGAAGATGAAGAGCAGTTTCATTCACCGAAAGCTTCTCCTTCTTCTTCACCAGTGGTTTCTGTTTCTGTTTCTGCTGCTGCTGCTGCAACAAGAACATCTTCATACCCTTTTTCACGTTCACCTTCTCTCAATCTTAGTCCTATTGAAAGTACCAATTCTTTTCCACCTCAGAACTCTGCATCTCCAAGTTTTTCTGCTTCCTCTTCACCTATGGAGAGGGAAGATTTGGATGGTAAGAATGTTCAAGTGAGCAAACTTTCTGCTCCTGCTCCGCCGCCTCTGCCACCGAGGTTAGTGGCTTCTCAAGATGTTAATGTTGATGTTAGGATTGAAAATGAGGAAAGTTCAAAGCCAAAGTTAAAGGCTTTACATTGGGATAAAGTTAAGGCCAGCTCAGATAGGGCCATGGTTTGGGATCACTTGAGACCAAGTTCATTTCAGTTGAATGAAGACATGATTGAGTCACTTTTTATGGTAAATAATTCCAATTCCAATGGAAATTCTGCTTTGGCTGCTAAAGATAATGCTCGGAGCCAAATAACCAATGCTGCTCCAATGCCGCCGGAAAATAGGGTGCTTGATCCTAAGAAGTCTCAGAACATTGCTATTTTGCTTCGAGCGCTGAATGTAACTATTGATGAAGTTTGTGAATCCCTCCGGGAAGGCAATTGTGATACACTGGGAACAGAACTTCTAGAAAGTTTATTAAAGATGGCCCCAACTAAAGAGGAAGAATCTAAGCTGAAGGAGTTTAAAGATGAATCGCCCTTCAAGCTAGGCCCGGCTGAGAAATTTCTTAAAGTCATGCTTGATATACCTTTTGCATTCAAAAGAATGGATGCTATGCTCTACATTGCTAATTTTGATTCAGAATTAGAATACCTGAAGAAATCCTTTGATACTCTGGAGGTGGCTTGTGAGGAATTAAAGAATAGTAGAATGTTTATGAAGATACTAGAGGCAGTTCTTAGAACAGGAAATCGAATGAATGTTGGCACCGATCGTGGTGACGCACAGGCATTCAAACTGGACACACTTTTGAAGTTGGTTGATATTAAGGGAACTGACAGAAAGACTACTCTTTTACATTTCGTTGTACAAGAAATTGTCAGAACCGAGGGTTCTCATGTATCTGGTGCTGACCATCACAATGTTGACTCCTTCAACAATCATCAGTGTACTCTTCAAGATGAGGTTGACTCGAGGAAGCTTGGACTGCAAGTTGTATCAGGTTTGAGTGGAGAACTCACTAATGTTAAAAAGGTAGCTTTTATGGATTCAGACACGCTGAGTAGCGATGTTGCTAAACTTGCCAAAGGAATCGAAAAGGTGTTGCTAGTTGTAAAATTGAATGAAGAGTCACCTTTGAAAGAAACCAACCAAAAATTTTCCGAGGCTATGAAAGGTTTCTTGGAGAGGGGTCAGGAAGAGATTTTAAGGATCCAGGCGCAAGAGAAAAGTGCCATCTCTTCAGTGAAGGAGGTAACTGAGTATTTCCATGGTAATTCGGCAAAGGAAGAAGCTCATCCGTTTAGGATATTTATGGTTGTGAGGGATTTCCTTTCGATACTAGATGGCGTATGCAAGCAAGTTGGTAAAGCAAATGAGAGGACTTTAGTTGGTTCGCGGCTAGATGTAATGCCTTCAATCACTACACTGCCATCAATTTTCCCCGAGTTTAATGGTAAGCAACCATCTGGCGATTCCTCAGAATCTGATTAG 2484 0.4275 MSKIIITTLFLFLFSSTVSSSFYHRRILHQPLFPSISLPPTQPPSSSPQTQPKQQQPKLPFSSMSSSSPPQSLTPPFFPTYQSPPQPPSPPFLATFPANISSLLLPTPHTKTHNHRSAAVLLISLSLFSILLLTLSAFFSYHRRHHNHKTSSTTANDDTASRSDSLRLFPPNTATSDSVDSKPSSGSEIFHLGTISSSENIKVTAESSCNGNAGFSPSYRHLTDSPELRPLPPLPRHNVRTSKNQQKKEEHIAREDEEQFHSPKASPSSSPVVSVSVSAAAAATRTSSYPFSRSPSLNLSPIESTNSFPPQNSASPSFSASSSPMEREDLDGKNVQVSKLSAPAPPPLPPRLVASQDVNVDVRIENEESSKPKLKALHWDKVKASSDRAMVWDHLRPSSFQLNEDMIESLFMVNNSNSNGNSALAAKDNARSQITNAAPMPPENRVLDPKKSQNIAILLRALNVTIDEVCESLREGNCDTLGTELLESLLKMAPTKEEESKLKEFKDESPFKLGPAEKFLKVMLDIPFAFKRMDAMLYIANFDSELEYLKKSFDTLEVACEELKNSRMFMKILEAVLRTGNRMNVGTDRGDAQAFKLDTLLKLVDIKGTDRKTTLLHFVVQEIVRTEGSHVSGADHHNVDSFNNHQCTLQDEVDSRKLGLQVVSGLSGELTNVKKVAFMDSDTLSSDVAKLAKGIEKVLLVVKLNEESPLKETNQKFSEAMKGFLERGQEEILRIQAQEKSAISSVKEVTEYFHGNSAKEEAHPFRIFMVVRDFLSILDGVCKQVGKANERTLVGSRLDVMPSITTLPSIFPEFNGKQPSGDSSESD 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01727 827 MobiDBLite consensus disorder prediction 48 71 - -
Trre7g01727 827 MobiDBLite consensus disorder prediction 153 186 - -
Trre7g01727 827 MobiDBLite consensus disorder prediction 38 92 - -
Trre7g01727 827 PANTHER FORMIN-RELATED 9 815 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trre7g01727 827 MobiDBLite consensus disorder prediction 145 186 - -
Trre7g01727 827 Gene3D Formin, FH2 domain 373 795 IPR042201 -
Trre7g01727 827 MobiDBLite consensus disorder prediction 72 92 - -
Trre7g01727 827 Pfam Formin Homology 2 Domain 366 778 IPR015425 -
Trre7g01727 827 MobiDBLite consensus disorder prediction 302 324 - -
Trre7g01727 827 SUPERFAMILY Formin homology 2 domain (FH2 domain) 343 791 - -
Trre7g01727 827 MobiDBLite consensus disorder prediction 242 262 - -
Trre7g01727 827 MobiDBLite consensus disorder prediction 216 272 - -
Trre7g01727 827 MobiDBLite consensus disorder prediction 302 333 - -
Trre7g01727 827 SMART it6_source 364 793 IPR015425 -
Trre7g01727 827 ProSiteProfiles Formin homology-2 (FH2) domain profile. 364 804 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01727 Trre-Chr7 13431441 13434874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01727 367 796 FH2 protein (formin) Gene Family AT3G25500 67.436 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01727 - - vun:114175163 891.723