Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01706 ATGCCTAGAAAGGGAATGAGAAGCGTTTTCTTCCATCCATCCACGTCATCAAAACTACCACCACCAACACCATCCTCACCTCTCTTCACTTTCTCAGACTCCTTAATGGAAGAAAACATCGAAACCGCAGAATCACTTATAACAAAATGGGATTATTCCAAAAAAATCATTACTCCTCTTTTCAGTGGAAACACTCGTTTAGAAGCCAAACAGTACCTAAACGCTGTTAAAGGTTTACAATCCGCTATGCAGTATCTTGTCACACGTGATTCCACCTCTAATTCTCTTATAAAAGCTCAATTCTTAATGCAACTTGCTATGAAAACACTTCAAAAAGAATTTTATCAGATTCTATCATTAAACAGAGAATATTTAGATCCTGAAACTGTTTCTAACCGTTCCTCAGTGGATCGTAGAAGCAGTGCTTCATTTTCCGATTATGACAGCGAAATCGAAATTTCCGACGACGAGTTTCGTGTCGCTGGAAATACGATTTCTGAAACGGAGAGAGTTTCTATGCTTGCTATGGCGGATTTAAAGGCTATTGCTGATTGTATGATAGCTTCTGGATATGGAAAAGAGTGTGTTAAGGTTTATGTTGTTATGAGAAAATCGATTGTTGATGAAGCGCTTTATCATCTCGGTGTTGAACGGTTGAGTTTTTCTCAGATTCAGAAAATGGATTGGGAAGTTATTGAGTTGAAAATCAAAACGTGGTTGAACGCTGTTAAGGTAGCAGTTGGAACTCTGTTTCACGGTGAGAGGATTCTCTGCGACGACGTGTTTGCGTCGGCGGGGAAGAGAATCGCTGAATCGTGTTTCGCGGAGATTACTAAAGAAGGTGCTATTTTACTTTTCACTTTCCCGGAAATGGTGGGAAAATGCAAGAAAACGCCGGAAAAAATGTTTAGAACACTTGATTTATACGAAGCAATCTCCGATAATTTTCAACAAATTCAATCGATTTTCTCGTTTGAATCAACTTCTAACGTCCGTTCACAAGCCGTTACATCTATGGTGAAACTCGCAGAAGCCGTTAAAACGATGTTAACGGATTTCGAATCAGCGATTCAGAAAGACTCATCAAAAAAACCAATCACCGGCGGTGGGGTCCATCCTCTCACGCGTTATGTAATGAACTACATCACGTTCCTCGCCGATTACAGCGGCGTGCTTTCCGATATCATTTTCGATTTACCACAATCTCCGTTGCCGGAATCTTACTATCAAAGTCCAATGCGCGGCGAGAATCAATCGTCTTCCGATATATCGGAGAAAATCGCGTGGTTGATACTCGTTCTTCTCTGTAAACTCGACGGAAAAGCTGAACTATACAAAGACGTAGCACTTTCTTATCTCTTTCTTGCGAATAACATGCAATACATCGTCGTAAAGGTTCGAAGATCAAATCTAGGGTTTCTTCTAGGAGAAGATTGGTTAACAAATCATGAATTGAAGGTTAAAGAGTACGTGTCGAAGTTCGTGCGTGTTGGATGGAATAAAGTGTTATCAACGTTGCCGGAAAATTCAACGGTGGATATGCCGGTGGAGAAGGTTAGAGAGAGTTTTGTGAAATTCAACGCTGCGTTTGATGAAGAGTGTAGGAAACAGTCTTCGTGGGTTGTAACCGACCCGAAACTTCGAGATGAAATCAAAGGCGCGATAGGTTCGAAGTTGGTAGCGAAATATGGTGGATTCTATGATATGAACCGGGTCGGGTTGGAGTCAGTTATCAGATATGAACCGGAAAATGTAGAGGGTTGTTTGTGTAATATTTTGTATGGAGTTGGAGATTCGGGCAGTGTTTCGTCGCATTCTTCATCGAGGGCGTCGTCTTCTTCTCGTGGTTCTAGTCGCGGGTGA 1863 0.4149 MPRKGMRSVFFHPSTSSKLPPPTPSSPLFTFSDSLMEENIETAESLITKWDYSKKIITPLFSGNTRLEAKQYLNAVKGLQSAMQYLVTRDSTSNSLIKAQFLMQLAMKTLQKEFYQILSLNREYLDPETVSNRSSVDRRSSASFSDYDSEIEISDDEFRVAGNTISETERVSMLAMADLKAIADCMIASGYGKECVKVYVVMRKSIVDEALYHLGVERLSFSQIQKMDWEVIELKIKTWLNAVKVAVGTLFHGERILCDDVFASAGKRIAESCFAEITKEGAILLFTFPEMVGKCKKTPEKMFRTLDLYEAISDNFQQIQSIFSFESTSNVRSQAVTSMVKLAEAVKTMLTDFESAIQKDSSKKPITGGGVHPLTRYVMNYITFLADYSGVLSDIIFDLPQSPLPESYYQSPMRGENQSSSDISEKIAWLILVLLCKLDGKAELYKDVALSYLFLANNMQYIVVKVRRSNLGFLLGEDWLTNHELKVKEYVSKFVRVGWNKVLSTLPENSTVDMPVEKVRESFVKFNAAFDEECRKQSSWVVTDPKLRDEIKGAIGSKLVAKYGGFYDMNRVGLESVIRYEPENVEGCLCNILYGVGDSGSVSSHSSSRASSSSRGSSRG 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01706 620 Pfam Exo70 exocyst complex subunit 238 589 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre7g01706 620 Gene3D Exocyst complex component Exo70 45 598 - -
Trre7g01706 620 PANTHER EXOCYST COMPLEX PROTEIN EXO70 29 589 IPR004140 GO:0000145|GO:0006887
Trre7g01706 620 MobiDBLite consensus disorder prediction 600 620 - -
Trre7g01706 620 MobiDBLite consensus disorder prediction 1 24 - -
Trre7g01706 620 SUPERFAMILY Cullin repeat-like 47 590 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01706 Trre-Chr7 13173093 13174955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01706 20 595 EXO70 exocyst subunit family AT5G59730 49.502 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01706 K07195 - gmx:100810579 835.484