Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01697 ATGTTGGATTATAGACAAGGTTGGTTATTTATATTTATATGTGTTTTACCAATTTTTCCTTTGGTGTGTTTTTCTACAACCTTTGTTCCTATAGACAATTACCTTATAGATTGTGGATCATATACAAATACTTCAATAGGTAATCTCAATTTCACATCAGATAATTTCTTTCATAATTTCCTTTCCACACAACAAGATATTCTTGCAAATACTTCTTTAAAATCAACCACTGATTATTCACCTCTTTATCAAACTGCAAGAATCTTTAATTCACCTTCAAAGTACACATTTCCTGTTAACAAAAAGGGTCGGCACTGGATTCGTCTTTATTTCTTTCCATTTATGTATCAGAATTTTAATCTTAGTGCTGCAAATTTTGCTGTTACCACTCAAAACAATGTTCTTCTTAGTAACTTTAGTGTGCCGAAAAAAGATCATGTTATGAAGGAGTATTTGGTAAATGTTACCTTAGACACCCTTGTCATAACCTTTACCCCGTCGAATAATTCTATAGCTTTTGTGAGTGGAATTGAAGTTGTTTCTGTACCTGATGAGCTAATTGCCGATGATGCTATTGCTTTGAATCCGCGGAGAGAGTATTCGGGATTGTTGACAATGTCACTCGAGACGGTTTTTAGGGTTAACATGGGTGGTCCAAGTGTTTCCTTAGGTGGTGACCCGCTTCATCGAACTTGGGTTCCAGATACAAGCTTTCTTATACAACCTAACCTTGCTAGTAATTTTTCGAGTATAGGTGCTGTTAAATATGTAAAAGGGGGTCCAACAGAAAATATTGCTCCGCCTAGTGTCTATGGTACTTTAACAGAGATGAACTCGGATAGTGATCCGCGTAGTAATTTCAATGTGACATGGAAGTTTAATGTGGAACCGGAATTTCAATACCTTGTGCGACTTCACTTCTGTGATGTAGTCAGTAAAAGTCTTAATGAACTCTATTTTAATGTATATATTGATTCCTTGTTGGCTGCTAAGGAACTTGACCTCAGTGGGAAGACTAAAAATGTGTTGGCTACTCCGTTTTATATGGATTTTGTTATGGAACCGTCTGTCGACAATAAAATTCTTGTGAGTATTGGCCCTTCTGATGTAAATAATGACTATCCTAATGCCATTTTGAATGGGCTAGAGATAATGAAAATGGACAACTCTAAGAGCAGTCTCAGTGCATCAACAGCCGTGTTTTTGAGCAGTAATCATGGTTCAAATTCTAAGAAAGTTGGCCTCATCGTCGGTGTGAGTCTTGGTGTATTTTGTGTGGTGGTGGCATTGGTCGGAGTTTTCTTTGTACTCCGCAGGAGAAGAAGACAGTTGGCACAACAAGGGGATTCAAAGACATGGGTTCCTTTATCGATCAACGATACTTCTCACACAATGGGAAGTAAAGATTCGAAAGGCACAGTAACAAGTGCTGCTTCAAACTTCGGGTATCGCTTCCCTTTTGTTGCAGTTCAAGAGGCCACAAATAATTTTGATGAGAGTTGGGTTATTGGTATAGGTGGTTTCGGTAAGGTATACAAAGGTGAATTAAATGATGGAACTAAAGTTGCTTGTAAGAGGGGGAACCCTCGGTCCCACCAGGGACTTGCAGAGTTCCGAACCGAAATCGAAATGTTGTCTCAGTTTCGCCATCGCCATTTGGTATCATTGATTGGATATTGTGACGAAAGGAATGAAATGATCTTGATATATGAGTACATGGAAAACGGAACGGTTAAAAGTCATTTGTACGGTTCAGGTCTCCCCAGCTTAAGTTGGAAGGAACGGCTCGAGATATGCATTGGAGCAGCTAGGGGACTTCATTACCTTCACACCGGCTATGCTAAAGCAGTTATTCACCGCGATGTAAAGTCGGCAAATATCTTGCTTGACGAGAATCTCATGGCAAAAGTGGCCGATTTTGGACTATCAAAGACCGGACCGGAAATCGATCAGACACACGTGAGTACAGCTGTCAAAGGGAGTTTTGGTTACCTTGATCCCGAGTATTTCAGAAGGCAACAGTTAACAGAAAAATCAGACGTGTATTCATTTGGGGTAGTTTTGCTTGAGGTTTTGTGTGCAAGACCGGTTATAGACCCATCTCTTCCTAGAGAAATGGTGAACTTGGCAGAATGGGCGATGAAATGGCAGAAAAGAGGGGAACTTGCACGAATCGTAGATCCAACGCTTGCAGGGAAAATCAGACCGGACTCTCTTAGAAAGTTTGGAGAGACTGCTGAAAAATGTTTGGCTGATTTTGGTGTCGATAGGCCTTCAATGGGAGATGTATTGTGGAATTTGGAGTATGCTCTTCAACTGCAAGAGGCTGTTGTTCAAGGCGATCCTGATGAAAACAGTACTAATATGATCGGTGAACTATCTCCACAAATAAACAATTTCGACCACGAATCAGGCGTTTCTGTCGCGCAATTTGAACCTTCGAGTCTCGACGATCTTTCAGGTGTTTCAATGAGTAAAGTGTTCTCACAGTTAGTGAAATCTGAGGGAAGATGA 2514 0.4018 MLDYRQGWLFIFICVLPIFPLVCFSTTFVPIDNYLIDCGSYTNTSIGNLNFTSDNFFHNFLSTQQDILANTSLKSTTDYSPLYQTARIFNSPSKYTFPVNKKGRHWIRLYFFPFMYQNFNLSAANFAVTTQNNVLLSNFSVPKKDHVMKEYLVNVTLDTLVITFTPSNNSIAFVSGIEVVSVPDELIADDAIALNPRREYSGLLTMSLETVFRVNMGGPSVSLGGDPLHRTWVPDTSFLIQPNLASNFSSIGAVKYVKGGPTENIAPPSVYGTLTEMNSDSDPRSNFNVTWKFNVEPEFQYLVRLHFCDVVSKSLNELYFNVYIDSLLAAKELDLSGKTKNVLATPFYMDFVMEPSVDNKILVSIGPSDVNNDYPNAILNGLEIMKMDNSKSSLSASTAVFLSSNHGSNSKKVGLIVGVSLGVFCVVVALVGVFFVLRRRRRQLAQQGDSKTWVPLSINDTSHTMGSKDSKGTVTSAASNFGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVACKRGNPRSHQGLAEFRTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMENGTVKSHLYGSGLPSLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEVLCARPVIDPSLPREMVNLAEWAMKWQKRGELARIVDPTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPDENSTNMIGELSPQINNFDHESGVSVAQFEPSSLDDLSGVSMSKVFSQLVKSEGR 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01697 837 SMART serkin_6 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01697 837 FunFam Receptor-like protein kinase FERONIA 573 788 - -
Trre7g01697 837 ProSiteProfiles Protein kinase domain profile. 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01697 837 Gene3D Phosphorylase Kinase; domain 1 459 572 - -
Trre7g01697 837 Pfam Protein tyrosine and serine/threonine kinase 502 693 IPR001245 GO:0004672|GO:0006468
Trre7g01697 837 FunFam receptor-like protein kinase FERONIA 461 572 - -
Trre7g01697 837 PANTHER OS07G0166700 PROTEIN 484 774 IPR045272 GO:0004714|GO:0006468
Trre7g01697 837 SUPERFAMILY Protein kinase-like (PK-like) 476 768 IPR011009 -
Trre7g01697 837 FunFam Putative receptor-like protein kinase 33 183 - -
Trre7g01697 837 FunFam Receptor-like protein kinase FERONIA 207 389 - -
Trre7g01697 837 Gene3D - 206 389 - -
Trre7g01697 837 Gene3D - 33 182 - -
Trre7g01697 837 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Trre7g01697 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Trre7g01697 837 Pfam Malectin-like domain 36 387 IPR024788 -
Trre7g01697 837 Gene3D Transferase(Phosphotransferase) domain 1 573 790 - -
Trre7g01697 837 CDD STKc_IRAK 503 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01697 Trre-Chr7 13075372 13077885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01697 12 837 Receptor kinase-like Gene Family AT3G46290 64.826 0.0 1074
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Trre7g01697 Malectin_like 2.2e-41 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01697 - - gmx:100806488 1318.91