Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01695 ATGCAGCAGCAGTATAACCAACTCGGTGAGTATGGCTCAGTCACACAGCCCAACTTGGAGGTGAGTTACAGTAATGGTGGTGGCAGCGGGTGCAGCAGCTACATGGGATCGCCGAGTAATTACGAGGAACGGTTGATGCAGAGGAGCATTAGTAGCCAATCGCTACAAAAGAATGATGGGCACCACCACCATCATCAACACCTTTTTCCAAATCTGTTTTCTGAATTGCTTGACACTGAGAATGGTCCGGTGCGACGAGTTTATAGTACCGGTGATCTTGATCAGAGAGTTAATGGATTGCAACAACATTATCATCATCAATCAGATAGTCCTTTGTCAACAGAGAGTAACATGATAATAGAAGAAATGAGCAGAGCAGCTAGTCCTTACAGCCCAGAAGAAAAGAAGGTCAGGATTGAGAGATATAAAAGCAAAAGAATCCAGAGGAATTACAACAAAAAAATTAAGTATGTTTGCAGGAAGACATTGGCAGACAGTAGGCCACGTATTAAGGGAAGATTTGCAAAGAATGATGAAATTGTGATGAATCCTCCAAATCAATATTGGAGCCATATTAGTAATAATGGAGATGAAATATTAGAAGATGAGGAAGATGAAAATTGGGACAATTTATTTGATTCATTGGTTCCTACTTCAAATCTTGCTCATGAGGAGGAGGAGGAGCCTCAACATAGTTCCTCCTTTGGTATGTTGTATTAA 720 0.4097 MQQQYNQLGEYGSVTQPNLEVSYSNGGGSGCSSYMGSPSNYEERLMQRSISSQSLQKNDGHHHHHQHLFPNLFSELLDTENGPVRRVYSTGDLDQRVNGLQQHYHHQSDSPLSTESNMIIEEMSRAASPYSPEEKKVRIERYKSKRIQRNYNKKIKYVCRKTLADSRPRIKGRFAKNDEIVMNPPNQYWSHISNNGDEILEDEEDENWDNLFDSLVPTSNLAHEEEEEPQHSSSFGMLY 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01695 239 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 28 201 IPR045281 GO:0009909
Trre7g01695 239 ProSiteProfiles CCT domain profile. 135 177 IPR010402 GO:0005515
Trre7g01695 239 Pfam CCT motif 137 177 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01695 Trre-Chr7 13063931 13067633 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01695 131 180 C2C2-CO-like Transcription Factor Family AT5G15850 46.000 4.79e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre7g01695 CCT 4.2e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01695 - - aprc:113859774 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04361 11 56093229 56095572 Trre7g01695 7 13063931 13067633 PCT