Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01694 ATGTATACAAACTTCAACCTTAAATTCTCACGCGCCACTGATACCCACTCCCATTTTCCATTGCCAATGCAGCAGCAGTATAACCAACTCGGTGAGTATGGCTCAGTCACACAGCCCAACTTGGAGGTGAGTTACAGTAATGGTGGTGGCAGCGGGTGCAGCAGCTACATGGGATCGCCGAGTAATTACGAGGAACGGTTGATGCAGAGGAGCATTAGTAGCCAATCGCTACAAAAGAATGATGGGCACCACCACCATCATCAACACCTTTTTCCAAATCTGTTTTCTGAATTGCTTGACACTGAGAATGGTCCGGTGCGACGAGTTTATAGTACCGGTGATCTTGATCAGAGAGTTAATGGATTGCAACAACATTATCATCATCAATCAGATAGTCCTTTGTCAACAGAGAGTAACATGATAATAGAAGAAATGAGCAGAGCAGCTAGTCCTTACAGCCCAGAAGAAAAGAAGGTCAGGATTGAGAGATATAAAAGCAAAAGAATCCAGAGGAATTACAACAAAAAAATTAAGTATGTTTGCAGGAAGACATTGGCAGACAGTAGGCCACGTATTAAGGGAAGATTTGCAAAGAATGATGAAATTGTGATGAATCCTCCAAATCAATATTGGAGCCATATTAGTAATAATGGAGATGAAATATTAGAAGATGAGGAAGATGAAAATTGGGACAATTTATTTGATTCATTGGTTCCTACTTCAAATCTTGCTCATGAGGAGGAGGAGGAGCCTCAACATAGTTCCTCCTTTGGTATGTTGTATTAA 786 0.4109 MYTNFNLKFSRATDTHSHFPLPMQQQYNQLGEYGSVTQPNLEVSYSNGGGSGCSSYMGSPSNYEERLMQRSISSQSLQKNDGHHHHHQHLFPNLFSELLDTENGPVRRVYSTGDLDQRVNGLQQHYHHQSDSPLSTESNMIIEEMSRAASPYSPEEKKVRIERYKSKRIQRNYNKKIKYVCRKTLADSRPRIKGRFAKNDEIVMNPPNQYWSHISNNGDEILEDEEDENWDNLFDSLVPTSNLAHEEEEEPQHSSSFGMLY 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01694 261 Pfam CCT motif 159 199 IPR010402 GO:0005515
Trre7g01694 261 ProSiteProfiles CCT domain profile. 157 199 IPR010402 GO:0005515
Trre7g01694 261 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 20 223 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01694 Trre-Chr7 13063865 13067633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01694 153 202 C2C2-CO-like Transcription Factor Family AT5G15850 46.000 6.13e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre7g01694 CCT 4.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01694 - - aprc:113859774 267.7