Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01690 ATGGAAGCATTTACAAGAGATCATCGAGGTTCACTTGAAGTCTTCAATCCATCTTCATCTGACATTGACAACAATAACAACAACGAGAATCCGAATTCGAATTTGAATTCGAATTCGAATCCAAATTCAGTCAATTCATGGAACAATTGGACAACAAACTCACGCGCCAATGAAACTCCACAACAACAAACACGCGACGCAATTAACTCCGATGAAGTCACCGTTGCAACTTCCTGGATGGCGCTGAAGGAAACAACTCCTCCTCCGTTAATTTCCGGCGAAACTGGCTCCGCTGCAGCGCAAAGAGCAGCGGAATGGGGATTAGTACTGAAAACTGATTCAGAGACAGGAAAACCACATGGAGTGGCAGTTAGAAACTCCGGTGGTGGTTCGAGAAGAGACTCGAATAATTCGATGAGAAGCTCCGGTGAGAGTTCCGATGACGGAAGAGGAATACCGAGAGTTTCGGAGGATTTGAGAGATGCATTATCGGCATTTCAACAAACATTTGTTGTTTCGGATGCTACCAAACCCGATTACCCGATTATGTATGCTAGTGCCGGGTTTTTTAATATGACGGGTTATACTTCTAAAGAGGTTATTGGAAGAAATTGTCGATTTATGCAGGGAGCTGATACGGATCCAAATGACGTGGCCAAGATAAGAGAAGCTTTAGCAGCGGGGACGACTTATTGTGGAAGGTTACTAAATTACAAGAAGGATGGGACACCCTTTTGGAACCTTCTTACTATTGCTCCCATCAAGGACGAAAATGGCAAAATCCTCAAGCTTATTGGAATGCAAGTAGAGGTTAGCAAGCATACAGAGGGGACCAAGGAGAAGATGTTACGTCCCAATGGATTGCCCGAATCCTTGATTCGATATGATGCTCGTCAGAAAGAGAAGGCAAATTCATCAGTAAGTGAGTTGGTGGAAGCAGTGAGCAAAAGACCACGCTCACTCAGTGAATCAACAAACCATCTTCCCTTCATCAAAACCCCAAAAAGTGTACTACGTGGTGGTGGTAATAATAATGATCATGCAACAAAACTACACAAAAAACTATCTAATTCCTCAAGGAGAAAATCTGAGAGTACATTACCTTCATTTAGACGTAAATCACATTCTGGATCAAGAGGTGACACTTTTAATTCAATGCACTCCATCACTGAGCTCCCCGAAAACAAAAACAACTCGCGTCGCCGTTCTTTCATGGGGTTGATCAGGAAAAGTCAATCAAACAATGAAAGCTTCAATGATGATGAACAAGTTATTGATGAGGATAGCTCTGAGGATGATCAAAGGTCTGATAGTTTTGATGACAAAATCACGAAAAAGAGAGAGAAGAGAAAGGGTCTTGATCTTGCTACCACACTTGAACGTATCGAAAAGAACTTCGTCATTACTGATCCAAGGCTCCCTGATAACCCTATTATCTTTGCATCTGATAGCTTCTTAGAGCTTACAGAGTATTCTCGTGAAGAAATATTAGGAAGAAATTGCAGGTTTCTGCAAGGACCTGAAACAGATCCTGCAACAGTGAAAAAAATTAGGCATGCTATTGACAATCAAATAGAAGTTACTGTGCAACTTATTAATTATACAAAGAGTGGTAAGAAGTTTTGGAACTTATTTCATTTGCAGCCAATGCGTGATCAGAAGGGAGAGGTACAGTATTTTATTGGAGTTCAACTTGATGGTAGTCAACATGTGGAGCCTCTTCACAACCGCATTGCAGATGATACAGCAAAGGAGGGAGAAAATTTGGTAAAAAAAACTGCAGAAAATGTTGATGATGCATTGAGAGAACTACCAGATGCTAATATGAAACCAGAAGATCTATGGATGAATCACTCAAAAGTGGTTCTTCCTAAACCTCATAGGAGGGATGATGTTGCTTGGAAAGCTATTCAGAAGATCATGGAGGGTGGAGAGCAAATAGGATTGAAGCATTTTAAGCCAATTAAACCTTTAGGGTCAGGCGACACCGGAAGTGTCCATCTGGTGGAGCTATGTGGAACTAATCAACAGTTTGCCATGAAGGCTATGGAGAAGAATGTTATGCTCAATCGAAATAAGGTGCATAGAGCTTGCACAGAGAGAGAAATCCTAGACATGTTGGATCACCCTTTTCTTCCTGCATTATATGCTTCTTTTCAGACCAAAACACATATTTGTTTGATAACTGATTACTGTCCTGGAGGAGAATTATTCTTGCTTCTTGAGCGCCAACCAGCAAAGGTTCTCAAGGAAGATGCAGTGAGATTTTATACCTCTGAAGTAGTTGTTGCATTGGAGTACCTTCATTGTCAAGGGATAATATATCGAGATTTGAAGCCAGAAAATGTGTTACTACAAAGCACTGGACACGTGGCTCTAACAGATTTTGATTTGTCATGTTTAACATCTTGCAAACCACAGCTTTTGATTCCAACTACAAATGACAAGAAGAAAGGCCAACAAGCTCCAATATTTATGGCTGAACCAATGAGAGCATCAAATTCTTTTGTTGGCACAGAAGAATACATAGCACCGGAAATTATAACTGGTTCTGGCCATACTAGTGCTGTTGATTGGTGGGCTCTTGGAATTCTTCTCTATGAAATGTTTTATGGATATACACCATTTAGAGGAAAGAATAGGCAAAGAACATTTTCAAATATTCTCCACAAGGATCTTAAATTTCCCAAAAGTAAACAGGTAAGTCTGAGTGCAAAACAATTGATTTATCACTTGTTGCAAAGAGATCCAAGTAGCAGATTGGGTTCAAAGGGAGGAGCAAATGATATTAAAAACCATTCATTCTTCAGAGGTGTCAATTGGGCCCTAGTTAGATGCACGAAACCTCCTGAGCTTGATGCTCCTCTCTTTGATACAAATGGAGAAAAAATGGAAAAGGAAGCCAAATATATAGATAATGGGCAAGAGGATATGAGTGTCTTCTGA 2946 0.405 MEAFTRDHRGSLEVFNPSSSDIDNNNNNENPNSNLNSNSNPNSVNSWNNWTTNSRANETPQQQTRDAINSDEVTVATSWMALKETTPPPLISGETGSAAAQRAAEWGLVLKTDSETGKPHGVAVRNSGGGSRRDSNNSMRSSGESSDDGRGIPRVSEDLRDALSAFQQTFVVSDATKPDYPIMYASAGFFNMTGYTSKEVIGRNCRFMQGADTDPNDVAKIREALAAGTTYCGRLLNYKKDGTPFWNLLTIAPIKDENGKILKLIGMQVEVSKHTEGTKEKMLRPNGLPESLIRYDARQKEKANSSVSELVEAVSKRPRSLSESTNHLPFIKTPKSVLRGGGNNNDHATKLHKKLSNSSRRKSESTLPSFRRKSHSGSRGDTFNSMHSITELPENKNNSRRRSFMGLIRKSQSNNESFNDDEQVIDEDSSEDDQRSDSFDDKITKKREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVKKIRHAIDNQIEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIADDTAKEGENLVKKTAENVDDALRELPDANMKPEDLWMNHSKVVLPKPHRRDDVAWKAIQKIMEGGEQIGLKHFKPIKPLGSGDTGSVHLVELCGTNQQFAMKAMEKNVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFLLLERQPAKVLKEDAVRFYTSEVVVALEYLHCQGIIYRDLKPENVLLQSTGHVALTDFDLSCLTSCKPQLLIPTTNDKKKGQQAPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMFYGYTPFRGKNRQRTFSNILHKDLKFPKSKQVSLSAKQLIYHLLQRDPSSRLGSKGGANDIKNHSFFRGVNWALVRCTKPPELDAPLFDTNGEKMEKEAKYIDNGQEDMSVF 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01690 981 Gene3D Transferase(Phosphotransferase) domain 1 736 947 - -
Trre7g01690 981 ProSiteProfiles PAC domain profile. 229 283 IPR000700 -
Trre7g01690 981 CDD PAS 466 566 IPR000014 -
Trre7g01690 981 ProSiteProfiles Protein kinase domain profile. 652 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01690 981 SMART pas_2 453 522 IPR000014 -
Trre7g01690 981 SMART pas_2 157 226 IPR000014 -
Trre7g01690 981 Pfam PAS domain 474 566 IPR000014 -
Trre7g01690 981 Pfam PAS domain 176 272 IPR000014 -
Trre7g01690 981 FunFam Putative LOV domain-containing protein 169 326 - -
Trre7g01690 981 Pfam Protein kinase domain 654 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01690 981 ProSiteProfiles PAS repeat profile. 155 225 IPR000014 -
Trre7g01690 981 CDD PAS 182 271 IPR000014 -
Trre7g01690 981 SUPERFAMILY PYP-like sensor domain (PAS domain) 176 268 IPR035965 -
Trre7g01690 981 ProSiteProfiles PAC domain profile. 525 579 IPR000700 -
Trre7g01690 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 773 785 IPR008271 GO:0004672|GO:0006468
Trre7g01690 981 FunFam Putative LOV domain-containing protein 736 948 - -
Trre7g01690 981 Gene3D PAS domain 440 604 - -
Trre7g01690 981 MobiDBLite consensus disorder prediction 379 419 - -
Trre7g01690 981 FunFam LOV domain-containing protein 651 735 - -
Trre7g01690 981 SMART pac_2 232 274 IPR001610 -
Trre7g01690 981 SMART pac_2 528 570 IPR001610 -
Trre7g01690 981 PANTHER FLIPPASE KINASE 1-RELATED 151 959 - -
Trre7g01690 981 Gene3D PAS domain 169 328 - -
Trre7g01690 981 MobiDBLite consensus disorder prediction 1 69 - -
Trre7g01690 981 MobiDBLite consensus disorder prediction 12 69 - -
Trre7g01690 981 MobiDBLite consensus disorder prediction 304 443 - -
Trre7g01690 981 CDD STKc_phototropin_like 650 955 - -
Trre7g01690 981 NCBIfam PAS domain S-box protein 182 276 IPR000014 -
Trre7g01690 981 NCBIfam PAS domain S-box protein 476 566 IPR000014 -
Trre7g01690 981 ProSitePatterns Protein kinases ATP-binding region signature. 658 681 IPR017441 GO:0005524
Trre7g01690 981 ProSiteProfiles PAS repeat profile. 451 524 IPR000014 -
Trre7g01690 981 SUPERFAMILY Protein kinase-like (PK-like) 637 955 IPR011009 -
Trre7g01690 981 SUPERFAMILY PYP-like sensor domain (PAS domain) 467 566 IPR035965 -
Trre7g01690 981 Gene3D Phosphorylase Kinase; domain 1 651 735 - -
Trre7g01690 981 MobiDBLite consensus disorder prediction 420 434 - -
Trre7g01690 981 MobiDBLite consensus disorder prediction 129 145 - -
Trre7g01690 981 FunFam LOV domain-containing protein 440 604 - -
Trre7g01690 981 SMART serkin_6 652 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01690 981 Coils Coil 583 603 - -
Trre7g01690 981 MobiDBLite consensus disorder prediction 111 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01690 Trre-Chr7 13013352 13022038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01690 6 978 AGC Kinase Gene Family AT3G45780 67.790 0.0 1325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trre7g01690 Pkinase 5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01690 K20715 - gmx:100804524 1442.17