Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01685 ATGAAAAATAATGTTGGGAAAAAGAGTTTGGTAGAACAAAATCACGTGCTTATTGACAGAAAGAGTCTAAATAATAGAGTAGTTAAGGAAGGGCCAGGCTCAGAATCATCGACTGAAAATGACACAAGATTTAGTAAAGTAACCAAAGATGAAAACAATGGGTTGAAGGGACCGGTTCAAATCCATGAGAGGTTGCAGATTTCGCAACAACCACCACCTCGAAATCCAGTTACATATTGGGAAAAATTTCTCCCTGTTACATCAATAAAAGTTCTGCTGGCGGACGATGATGATTCAACACGCAATGTTGTGTGTGCTCTGTTAAGGAATTGTGGTTATGAAGTCACTGCTGTTTCCAATGGTCTCCAAGCGTGGCAAACTCTAGAAGATCCAGAAAATCACATTGATCTTGTTCTAACAGAGGTAGCTATGCCTGTTGTATCTGGAATAAGTCTTTTGTGCAAGATCATGAGCCACATCTCTCTGAAGAATATTCCTGTCATTATGATGTCTTCTCATGATTCTATGGGTATAGTCTTTAAGTGCTTGTCAAAAGGCGCAGCTGATTTTTTAGTGAAACCTATCCGGAGGAATGAACTTAAAAACATCTGGCAACATGTTTGGAGAAGATGCCATAGTTCTAGTGATAGTGGGAGTGAAAGTGGGACAAACACCCGGAAATTTGCAAAGTCGAGAAGCATTTGTGCATATGACAACAATAGTGGTAGCAATGATGAGAATGATTATGGAAGCAGAGGCTTGAGTACTCGAGATGGCAGTGACAAAGGAAGTGGAACTCAGAGTTCATGGACTACAAATCTAGCTCAATCTCATGATACTCCTGATAGCACGTGTGCCCAAGTGGTTTATACAAAGCCTGAAAACAGTAGTAGTGTGCAGGTCCATGCCTCAGAAAAAGAGTGCCATGAACCAATTGATCATCCTGATGAGATTGCAATGGGTAAAGATTTAGCAATGGGAATATCTTTGAACATGAAAGAAAACCACCCACTTGAGGAACTGTCTAACAATCCAATGCGTAAAGGGGTTAATAAGATGTTTGATATTGATGGTATTCAGCTCATTAAAGGACAGAGTAATGTCTGTGAAAAAGTACAACTGGAGGATGACAGTGATAAAACCAGGATGCAGGAAAATCAGCCTATGAATGTTGGTGTTACTGATAGCAGCAGTCCACAGGCTGAAAGCAGAGATTTGAACACTTCAAATGGTTTTTCTGGTTTTGCCAAAACAAAAGCAAGTTGTTGCTTCGAACAGCATCCATCACTTGACCTATCATTAAAAAGGATGGGAGAAGTAAAAGACGCTGAACATGTCACAGGTGATGAAAGTAATGTTTTGAGACATTCAGATCTGTCAGCATTCTCCAAATATAATACAGCTTCTGCTTACCAGGCTCAAACTGGAAATGTAGGAAGCTGCTCCCCGCTAGACAATAGCTCAGTTGCACCAAATACAGAGACAATACAGAACTTCACATCTCATTCAAATGCCACTCCTCCAAATCAACAGTCTAATGGGAGCAACAACATCAATGACCTGGCTTACACTAATATATATCTTAGCAGCAAACATGAAAATTTTGACAAGAAACCCGAGTCTGCCAGAGGGATTGGCTCTTTTATTTCTTCTGAACTCCAAACCGTGCAAAATAATAGTATCTCTGCATCTCAGAAGAAGACTTCTTCCCAGGAAGAATGTGCCGGAATCATTAAAGGACATGTAGGAGGCTCTGAACAAGGATTCCAAGTCGAGCACATTCACCATCAACTTCAACATTGTAATCGCATCGCCCACAAGGCTGCAGAGGATCTCCAATCAGTTCATGATCTCTTACATAAAAGCACGACCAAAGTTGCTCAGCAATGTATGTCATCAAATGTGTTTGGAGGGCCGGAAGAAGGTAATGCTGCTGCAAACTATGGCTTGGATGGAAGTACAGCTGAGAGTGATCATGGGAGCAATGGACAGGGTGGAAGCAACACTTTGACAGTCAAAATGACAAATGTGGAAAATGGCGATGCAGCACCGGGGAGCTTTGGAGTTGGTGGCATTGATAAAATAAACATTGGAAGTGTGTCATATGAAGAACGAATTGCATTGAGAGAGGCTGCCTTGACAAAATTTCGACAAAAGAGAAAAGAAAGATGCTTTGAAAAGAAGGTTAGATATCACAGCAGGAAAAAATTGGCAGACCAGCGGCCACGTGTTAAGGGACAATTTGTCAAACAAATAGTGTCTGACACTAAAGATGAAGAAAATAAAGAAAGCGAGGACCTTGTATCTATGGATAATTCTAGTGATGTTCCACAGCAGTACCAATCAAAAAGCTGA 2355 0.4085 MKNNVGKKSLVEQNHVLIDRKSLNNRVVKEGPGSESSTENDTRFSKVTKDENNGLKGPVQIHERLQISQQPPPRNPVTYWEKFLPVTSIKVLLADDDDSTRNVVCALLRNCGYEVTAVSNGLQAWQTLEDPENHIDLVLTEVAMPVVSGISLLCKIMSHISLKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKNIWQHVWRRCHSSSDSGSESGTNTRKFAKSRSICAYDNNSGSNDENDYGSRGLSTRDGSDKGSGTQSSWTTNLAQSHDTPDSTCAQVVYTKPENSSSVQVHASEKECHEPIDHPDEIAMGKDLAMGISLNMKENHPLEELSNNPMRKGVNKMFDIDGIQLIKGQSNVCEKVQLEDDSDKTRMQENQPMNVGVTDSSSPQAESRDLNTSNGFSGFAKTKASCCFEQHPSLDLSLKRMGEVKDAEHVTGDESNVLRHSDLSAFSKYNTASAYQAQTGNVGSCSPLDNSSVAPNTETIQNFTSHSNATPPNQQSNGSNNINDLAYTNIYLSSKHENFDKKPESARGIGSFISSELQTVQNNSISASQKKTSSQEECAGIIKGHVGGSEQGFQVEHIHHQLQHCNRIAHKAAEDLQSVHDLLHKSTTKVAQQCMSSNVFGGPEEGNAAANYGLDGSTAESDHGSNGQGGSNTLTVKMTNVENGDAAPGSFGVGGIDKINIGSVSYEERIALREAALTKFRQKRKERCFEKKVRYHSRKKLADQRPRVKGQFVKQIVSDTKDEENKESEDLVSMDNSSDVPQQYQSKS 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01685 784 SMART REC_2 89 204 IPR001789 GO:0000160
Trre7g01685 784 Pfam Response regulator receiver domain 91 202 IPR001789 GO:0000160
Trre7g01685 784 Pfam CCT motif 709 751 IPR010402 GO:0005515
Trre7g01685 784 MobiDBLite consensus disorder prediction 384 406 - -
Trre7g01685 784 ProSiteProfiles CCT domain profile. 709 751 IPR010402 GO:0005515
Trre7g01685 784 MobiDBLite consensus disorder prediction 498 518 - -
Trre7g01685 784 MobiDBLite consensus disorder prediction 646 671 - -
Trre7g01685 784 ProSiteProfiles Response regulatory domain profile. 90 208 IPR001789 GO:0000160
Trre7g01685 784 MobiDBLite consensus disorder prediction 770 784 - -
Trre7g01685 784 ProSiteProfiles Rhodanese domain profile. 103 134 IPR001763 -
Trre7g01685 784 MobiDBLite consensus disorder prediction 752 769 - -
Trre7g01685 784 MobiDBLite consensus disorder prediction 239 282 - -
Trre7g01685 784 MobiDBLite consensus disorder prediction 22 55 - -
Trre7g01685 784 FunFam Two-component response regulator-like PRR37 89 247 - -
Trre7g01685 784 PANTHER TWO-COMPONENT RESPONSE REGULATOR 90 397 IPR045279 GO:0009736
Trre7g01685 784 MobiDBLite consensus disorder prediction 376 406 - -
Trre7g01685 784 MobiDBLite consensus disorder prediction 736 784 - -
Trre7g01685 784 MobiDBLite consensus disorder prediction 654 671 - -
Trre7g01685 784 SUPERFAMILY CheY-like 88 215 IPR011006 -
Trre7g01685 784 CDD psREC_PRR 91 194 - -
Trre7g01685 784 Gene3D - 88 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01685 Trre-Chr7 12983383 12988397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01685 36 469 Response Regulator Gene Family AT5G60100 43.820 2.76e-82 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Trre7g01685 Response_reg 1.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01685 K12129 - gmx:100785796 914.835