Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01671 ATGGATCATCTCACAGAAAAATTACCTCCAATGGATCTCATGCGTTCCGAAAAGATGACCTTCGTTCAACTCATCATTCCCGCCGAGTCCGCTCACCGTTGCATTACCTATTTAGGCCAACTCGGTCTTCTTCAATTTCGCGACTTAAATTCTGAAAAGAGCCCCTTCCAGAGGACATTTGTTAACCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTACGGTTCCTCATGGATCAGATCAATAAAGCTGGGATAATGTCTTCCCTTTCTGTCTTGCAATCAGATACACACTTGGAGGATATAGAGACACAACTTTCTGAGCATGAACACGAGATAATTGAAATAAACTCTAACAGTGAGAAACTTCAGCAATCATATAACGAACTCCTTGAGTTCAAGATTGTACTGCAAAAGGCATGTAGTTTTCTTGTTTCAAGTCATGGCCAGGCCGTTTCAGAAGAGAGAGAACTGGAGGAGAATGTTTACTCAAATGGAGACTTTGTTGAGACACCATTTTTGTTTGAACAGGAAATTGTGCCTGGACCATCAAAATCAAACGAATCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAAGTTCTCAGGTTTGAAAGGATGTTGTTTCGTGCCACAAGAGGCAATATGCTTTTCAATCAGGCACCGGCTGATGAACAAATTATGGATCCTATTTCAAATGAGATGGTTGAGAAGACTGTGTTTGTTGTGTTTTTCTCTGGAGAGCAAGCAAGAACAAAGATTCTGAAAATTTGTGAAGCATTTGGTGCAAATTGCTACCCTGTTCCTGAAGATATAAGTAAACAAACACAAATAACTCGGGAGGTTTCATCACGCCTTGCTGACTTAGAGGCAACTTTGGATGCTGGGATTAGGCATCGGAATAAGGCTCTATCTTCTGTAGGAGGTCATTTAGCAAAATGGATGGACATGGTAAGAAGAGAGAAGGCTGTATATGATACGCTGAACATGTTAAATTTTGATGTCACCAAAAAATGTCTTGTTGCAGAGGGCTGGTGTCCAATATTTGCAAAAGCACAGATTCAGGATGCCCTGCAACGTGCAACTTTTGACAGCAATTCTCAAGTGGGGGTAATCTTTCATTCAATGGATGCACTGGAATCACCACCGACATATTTTAGGACCAACAATTTCACAAATCCATATCAAGAAATTGTAGATGCCTATGGTGTTGCAAGATATCAAGAAGCAAATCCAGCAGTTTACACAACTATTATATTCCCATTTCTTTTTGCCGTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGCTGCTTGGAGCATTGGTTCTTATAGCACATGAAAGAAAGCTCAGTAATCAGCGACTGGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGATTCTTTTGATGTCACTATTTTCAATGTATTGTGGGTTAATCTACAATGAATTCTTCTCGGTTCCTTTTCACATATTTGGTGCGTCTGCTTACAAATGCCGAGATATGTCATGCAGGGATGCGCATACTGCTGGCTTAGTAAAATACAGGGAACCATACCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGCCCTTTCTGAATTCTCTCAAGATGAAGATGTCCATTCTGTTTGGTGTGGTGCATATGAACTTAGGAATTATGTTAAGCTACTTCAATGCTCGTTTCTTTGGCAGTTCACTGGATATAAGGTATCAGTTTGTGCCGCAGATGATTTTCCTTAACAGTCTATTTGGGTATCTTTCCCTTCTCATTGTTGTCAAGTGGTGTACTGGCTCTCAGGCAGACCTTTATCATATAATGATTTACATGTTTTTAAGCCCCTTTGACAAGCTTGGTGAGAATGAGTTGTTCTGGGGCCAAAGGCCACTTCAAATTCTGTTATTGCTTCTGGCTCTAATTGCAGTTCCATGGATGCTCTTTCCAAAGCCTTTTATATTAAAGAAACTTCATAATGAGAGATTTCAAGGACGCAATTACGGTGTTCTTCATACCTCAGAGATAGATATTGAGGTGGAACCGGATTCTGCTAGGGCCATGCAACATCATGATGACTTTAATTTCAGCGAGGTCTTTGTTCACCAAATGATTCACTCCATTGAGTTTGTTCTGGGTTCTGTTTCAAATACGGCATCATATCTCCGACTTTGGGCATTAAGCTTGGCTCACTCAGAGCTTTCTACTGTTTTTTATGAGAAAGTTCTGCTACTAGCATGGGGGTATGACAATCTTCTCATTCGGTTAGTGGGACTAGTTGTTTTTGCATTTGCAACTGCTTTTATACTACTTATGATGGAGACTCTGAGCGCTTTTCTTCACGCCCTGCGACTTCATTGGGTTGAATTTCAAAATAAATTCTACCATGGTGATGGCTACAAATTCAGACCTTTTTCCTTTGCCAACTTAGCAGATGATGAAAATTGA 2469 0.407 MDHLTEKLPPMDLMRSEKMTFVQLIIPAESAHRCITYLGQLGLLQFRDLNSEKSPFQRTFVNQVKRCAEMSRKLRFLMDQINKAGIMSSLSVLQSDTHLEDIETQLSEHEHEIIEINSNSEKLQQSYNELLEFKIVLQKACSFLVSSHGQAVSEERELEENVYSNGDFVETPFLFEQEIVPGPSKSNESGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPADEQIMDPISNEMVEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKQTQITREVSSRLADLEATLDAGIRHRNKALSSVGGHLAKWMDMVRREKAVYDTLNMLNFDVTKKCLVAEGWCPIFAKAQIQDALQRATFDSNSQVGVIFHSMDALESPPTYFRTNNFTNPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALVLIAHERKLSNQRLGSFMEMLFGGRYVILLMSLFSMYCGLIYNEFFSVPFHIFGASAYKCRDMSCRDAHTAGLVKYREPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVVHMNLGIMLSYFNARFFGSSLDIRYQFVPQMIFLNSLFGYLSLLIVVKWCTGSQADLYHIMIYMFLSPFDKLGENELFWGQRPLQILLLLLALIAVPWMLFPKPFILKKLHNERFQGRNYGVLHTSEIDIEVEPDSARAMQHHDDFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLLIRLVGLVVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFANLADDEN 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01671 822 Pfam V-type ATPase 116kDa subunit family 37 814 IPR002490 GO:0033179|GO:0046961|GO:1902600
Trre7g01671 822 PANTHER VACUOLAR PROTON ATPASES 13 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
Trre7g01671 822 Coils Coil 99 126 - -
Trre7g01671 822 PIRSF ATP6V0A1 9 822 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01671 Trre-Chr7 12834353 12843613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01671 1 815 Primary Pumps ATPases(2) AT2G28520 78.825 0.0 1329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01671 K02154 - gmx:100800799 1456.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04229 11 54967950 54977770 Trre7g01671 7 12834353 12843613 PCT