Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01590 ATGAAGTCGCAGATCAAAATTGCTCTTGCTATTGTTATTAGTTTACTCTGGATTCCACATGCCCTTTGTGGTGATGAAGCATCTGATACATCTGGCCTAAACAAGTGGAAATGTAGATGTTCTTCTTTTGAAGGGAACCAAAGCAACTATCTTGCTAATTGTTCGAAATCATGTGATTGCCATTCAGATTCTGAAGGGGGTGCATCCATATGGACATGCATATGTGATCCCGATGGATTTCCCCATGTGGCAGAAGATGGTCATAGCTCTAACTGCTTTCATGCCTGCAACTGCACCTGGGGAACTGTCGACACGCCATCAGGTTCAAAGAAACACATTTCCAGCAAGGTTGTTGTAATTATCCTATTGATATGTGTTATATGCACAACCGTTGCACTGCTTACCTCAGTTGTATGCTACATCTACCGAAGGGACAGATGCAATATTAAATCACCAATATTTTCATCCGATAAGGATACGAGTAGTGGTAGTACCACCAACCTAATCAGTTATAGGACAGGAACTTCTTCAAAGCCAGAAACAAAACTTTTTATAAATTCTCCTATTTATCATTTCACAGGATGCTTTCAGAAAGCCTCTTTTTTGTTTGGGAGCCAAAAAGAAACTTTTCATGGAAATATTATTCAATTTTCATTTGCTGAACTGGAAAGTGCCACTGATAACTTTTCAGCTACCAACCTTATTGGATTAGGCGGAAGTAGTTATGTATACCGCGGTCGGCTGAAAGATGGTAATATTGTGGCTGTTAAGCGACTAAAAGATCATGGAGGGCCAGAAGCAGACTCTTCATGTTTCAAGGAGATTGAACTATTAGCTAGACTTCATCATTGTCATTTGGTGCCGTTGCTTGGATACTGCTTAGAATCGAAAGGAAAACATGTTCAGAGGTTACTAGTATTTGAGTACATGACTAATGGGAATTTGAGGGAATGTTTAGACGGAGTTTCTGGAAAATATATGGATTGGACTACTCGTGTTACGATTGCAATAGGAGCAGCAAGGGGGTTGGAGTATCTCCATGAAGCAGCTGCTCCAAGAATTCTTCATAGAGATGTGAAATCAACCAACATTCTTCTGGACAAAAATTGGCAAGCAAAAATAACTGATCTTGGTATGGCTAAAAACTTGAGATCTGATGACCTACCAAGCTGTTCAGGTTCTCCAGCAAGAATGCAGGGGACATTTGGCTATTTTGCACCCGAGTATGCTATTATTGGTAGAGCCTCGCTTGAATCAGATGTCTTCAGTTTTGGTGTGGTTCTTCTCGAGCTTATTAGTGGTCGACATCCTATCCATAAAACTTCAGGCAAAGAAGAAAGCCTTGTTATATGGGCTTCTCCTCGTTTACAGGATAGCAGACGAGTAATAATAGAGTTAGTTGATCCACAATTGAAAGGTAACTTCCCAGAGGAAGAGGTGCATATAATGGCATACCTAGCAAAAGAGTGCTTGCTTCTGGATCCCGATACTCGACCAACCATGAGCGAAGTTGTTCAAATTCTTTCAAGTATTACTCCAGGAAAATCAAGGAGGAGAAGAAACATTCCCACTAGCTTGTTTCAGGAACTGGAGGATGCCGAAAAGCACAGACAATTTCCATCGAGTAAATTTCCAGATCATAATTCATTGTCGCTAGATGTCGATCACAATCCGTGTGTTGTGAACAAAAATAAAGAAGCAGATGCAGTTTCACCTGAGTATATGGAAAGTTTAATCCTCTTGACATCAAAATCTGATGGCTGGCATGCATCAGAAGAAGAAATGGTAGACATAATCGAGCCTCGGTTTGAATCATTTTGCATGACAAATGGCACAGTCCCTTGA 1845 0.406 MKSQIKIALAIVISLLWIPHALCGDEASDTSGLNKWKCRCSSFEGNQSNYLANCSKSCDCHSDSEGGASIWTCICDPDGFPHVAEDGHSSNCFHACNCTWGTVDTPSGSKKHISSKVVVIILLICVICTTVALLTSVVCYIYRRDRCNIKSPIFSSDKDTSSGSTTNLISYRTGTSSKPETKLFINSPIYHFTGCFQKASFLFGSQKETFHGNIIQFSFAELESATDNFSATNLIGLGGSSYVYRGRLKDGNIVAVKRLKDHGGPEADSSCFKEIELLARLHHCHLVPLLGYCLESKGKHVQRLLVFEYMTNGNLRECLDGVSGKYMDWTTRVTIAIGAARGLEYLHEAAAPRILHRDVKSTNILLDKNWQAKITDLGMAKNLRSDDLPSCSGSPARMQGTFGYFAPEYAIIGRASLESDVFSFGVVLLELISGRHPIHKTSGKEESLVIWASPRLQDSRRVIIELVDPQLKGNFPEEEVHIMAYLAKECLLLDPDTRPTMSEVVQILSSITPGKSRRRRNIPTSLFQELEDAEKHRQFPSSKFPDHNSLSLDVDHNPCVVNKNKEADAVSPEYMESLILLTSKSDGWHASEEEMVDIIEPRFESFCMTNGTVP 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01590 614 Gene3D Phosphorylase Kinase; domain 1 203 309 - -
Trre7g01590 614 ProSitePatterns Protein kinases ATP-binding region signature. 235 257 IPR017441 GO:0005524
Trre7g01590 614 Gene3D Transferase(Phosphotransferase) domain 1 310 529 - -
Trre7g01590 614 FunFam receptor-like serine/threonine-protein kinase NCRK 203 309 - -
Trre7g01590 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 354 366 IPR008271 GO:0004672|GO:0006468
Trre7g01590 614 CDD STKc_IRAK 235 511 - -
Trre7g01590 614 FunFam receptor-like serine/threonine-protein kinase NCRK 310 520 - -
Trre7g01590 614 Pfam Protein kinase domain 232 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01590 614 PANTHER OS01G0750732 PROTEIN 34 516 - -
Trre7g01590 614 ProSiteProfiles Protein kinase domain profile. 229 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01590 614 SMART serkin_6 229 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01590 614 SUPERFAMILY Protein kinase-like (PK-like) 210 508 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01590 Trre-Chr7 12073467 12077553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01590 1 610 Receptor kinase-like Gene Family AT2G28250 51.136 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Trre7g01590 Pkinase 2.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01590 - - gmx:100817870 1001.89