Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01585 ATGGAAACTAGTCTTGTATTTATCTATAACAAAATCATGATTCATCTTTGGTTTATTGCATTGATATGCTTAACTTCATGCTATTCTCAACAACCTTATGACATTTCCAATTGTTTTTCAAATGAAACACATCCTGGTTCAAGGTACACATGCAATTCAACACAAGACACATGCAAAACATTCTTAGTATATAGAGCCAACCAAAATTTCAAAACCATTTCACAAATCTCAAATCTCTTCAACAAAACTACTAATGAGATTCTTCAAATAAACAACCTTACATCTTCATCTCAAATACTCAAACAAGGTAAAGAAGTCCTTATTCCTATCGAATGTACATGTTCTGAACAATTTTACCAAGCGAATTTCAGCTACAAAGTTCTTGAAAACTCAACAACATTTTCAAATATTGCTTGTGAAGTTTTTGAAGGACTAGTGAAACATCTCACACTTTTTGATGAAAACCAATCAAAACAAGGTAATGAACCAAAAATTGATGATGTTCTTCATGTACCACTTAGATGTACATGTCCAAAAAATAATGTCTCTAGTATTAAAAGGGTAATAAAGTATTTTGCTACATACCCTCTTATACAAGGAGATAATTTTGATATATTGGTTAAGAAATTTGGTTTCTCACTTGATGATTTCTTAGAAGCTAATCAATTACAAACCTTTTCATCAATTTTTCCTAATACAGTTGTTTTAATTCCATTAAGAGATGATGAAAATGGTCCAATCCAAATATTTGATATTCCAGATTCTCCTTCTCCACCACCTAATTTTCTTCCAACAAATCCATTTGAATCACAAGGATCAACACAAACATCAAATTTATATATTGCAGGACCTATCATAGGGTTTGTAATAATCATCATAACATTGATTGCAAGTGGATTCTATATGAAGAAATTAAGAAAAAATGATGTTGTTATTGATTCCTTTAATCCAAAAAGTACTTCAAATTCAAACACTTTGTATTCAACAATGAGAGCTTCTACAACTTCATGTTTATCTCCTGATTTTCTTGTTGGAATAAAGTATTGTTTGCTTAATTACCATATAGAAGAGATAGAGAAAGCAACAAATTTTTTTAGTGATATGAACAAGATTGGTGATTTTGTTTATAAGGCGTTAATCAATGATATTGAAGTGATGGTAAAGAGGTTAAGATTTGAAGATACTAGTGAAGTAATTGATTTACATTCAAGAATAAATCACATTAATATTGTGAATTTAGTTGGTGTTTGTTATGGTGAGGCTAATGATATTTCATGGTCTTATTTAGTTTTTGAGTTACCTAAAAATGGTTGTTTAAGGGATTGTTTATTGGATTTGGATCCTTGCAATAGTCTAAGTTGGTATAGAAGGACACAAATAGCATTTGACATAGCAACATGTCTTTACTATTTACATTATTGTTCTTTTCCTTCTTATGCACATATGAATGTGAATAGTAGAAATATATTTGTGACTGAAAACTGGAGAGGTAAATTAGCAGATGTTGGGGGTGTGTCTAATAATCTCTTGCATGGAATAGTTTCACAAAAGGTTGATATTTTTGCATTTGGTGTTGTTTTACTTGAGTTGATATCAGGAAGAGAGAATTTAGATGGAAAATTGATGAAAGATTGTGTTGGTTTTTTGTTGGGGGAAGGTAGTGAAAGTGGGGGTGGATGTTTTGAAGGGTTAAGGAGTTTTGTGGATCCAAATTTGAAGGAGTATTCTCTTCCTGAGGCTCTTTGTTTGTGTTTTTTAGCTAAGGATTGTGTGAAAGATGATCCATTGCTTAGGCCAACTATGGATGATATCATGAAGGTTCTTGCAAAAATGGTTTAG 1839 0.3116 METSLVFIYNKIMIHLWFIALICLTSCYSQQPYDISNCFSNETHPGSRYTCNSTQDTCKTFLVYRANQNFKTISQISNLFNKTTNEILQINNLTSSSQILKQGKEVLIPIECTCSEQFYQANFSYKVLENSTTFSNIACEVFEGLVKHLTLFDENQSKQGNEPKIDDVLHVPLRCTCPKNNVSSIKRVIKYFATYPLIQGDNFDILVKKFGFSLDDFLEANQLQTFSSIFPNTVVLIPLRDDENGPIQIFDIPDSPSPPPNFLPTNPFESQGSTQTSNLYIAGPIIGFVIIIITLIASGFYMKKLRKNDVVIDSFNPKSTSNSNTLYSTMRASTTSCLSPDFLVGIKYCLLNYHIEEIEKATNFFSDMNKIGDFVYKALINDIEVMVKRLRFEDTSEVIDLHSRINHINIVNLVGVCYGEANDISWSYLVFELPKNGCLRDCLLDLDPCNSLSWYRRTQIAFDIATCLYYLHYCSFPSYAHMNVNSRNIFVTENWRGKLADVGGVSNNLLHGIVSQKVDIFAFGVVLLELISGRENLDGKLMKDCVGFLLGEGSESGGGCFEGLRSFVDPNLKEYSLPEALCLCFLAKDCVKDDPLLRPTMDDIMKVLAKMV 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01585 612 Gene3D Transferase(Phosphotransferase) domain 1 508 611 - -
Trre7g01585 612 Gene3D Phosphorylase Kinase; domain 1 330 432 - -
Trre7g01585 612 ProSiteProfiles Protein kinase domain profile. 290 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01585 612 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 16 611 - -
Trre7g01585 612 Gene3D Transferase(Phosphotransferase) domain 1 435 507 - -
Trre7g01585 612 Pfam Protein tyrosine and serine/threonine kinase 383 503 IPR001245 GO:0004672|GO:0006468
Trre7g01585 612 ProSiteProfiles LysM domain profile. 193 237 IPR018392 -
Trre7g01585 612 Pfam LysM domain 200 238 IPR018392 -
Trre7g01585 612 SUPERFAMILY Protein kinase-like (PK-like) 348 608 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01585 Trre-Chr7 12014176 12016014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01585 15 612 Receptor kinase-like Gene Family AT2G23770 29.199 6.82e-63 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Trre7g01585 PK_Tyr_Ser-Thr 8.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01585 - - lja:Lj1g3v4047410.1 736.487