Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01582 ATGAGACCAGAACAATTGCATGTTGCACAACAAATAAGGCGTGACAAATTAAGAATTCAGAATCATATGCAACAAGAATTTGCTAACAACAATATAGAAGAATTATTATCACTACATCAACCACCACAAGGATTCAATAACATGGATCTTCTTCAACTCAGAAATGCTAACAACAACAACAACATGCTTAATGATGATGAATCAGGTCATTATCCATCTAATCAAATCTTTTCAACAACATCAAATCCTTTACATAGAAACCCTTTGGATTATGAGCTAGCTATTGCTGAACCAAGTAGTAGTAACATTAATAGACTCAATTATTATTATCATCCAAATGAAACCAATATTATTCCAAACTCTTTCTTAACTTCTCATGAACAACAACAACAACTTAACAGTACTAATGATGTTTTCAAGTCTCCAACTTCTTCAGAAATGGCTTCTTTAATGCACCATCATCATAGCATTTGGGGAGGTGTAAATAGTCATAATACTAATGCTAATAGTATTGTGCCTATATTTCATGAAAATCAACATCAATGGACAAACAACAACATGGGTTCTTTTTTTAGTGATTATAATCCACAAGGTTTATCTTTATCACTTTCATCAAATTCACAATCAAAACAACCTTCATCATCTACTTCAAATTTTGAACAAGGTTCATTAAATATTGTGAAACCATCTTTAGTTTCAAGAGATTGTGTGAAACCAATTCATCAAGAACAACAACAACAACAACCTAGTAGTAGTAGTAGTGGTTTTAGAAATGTTGGTCCTCTAGGACCATTTACTGGGTATGCAACAATTTTGAAAAGTTCAAGGTTTTTAAAACCATGTCAAGAGTTGTTAGAAGAATGTTGTTGTGATAAAAATGTTGTTCCAAAGTGGGTTTCTCGAGATGTTATTGGTGTTGATGATGAAAGTGGGGGTGTTGTTTCTGCAAAAGGTAGTACTAGTAATTCAGGTGGTACTTCATCTTGTTCTATGTTGTATGGTTCAAAAGAGAAAGAGAACAGTAATGGTGATGGAGGAATTGGGAATAATTTTTGTCTTTCTTCTTCTTCTTCTTCTACTTCTCGACCAGAGTGCCAAAAGAATAAGGCTCAATTACTGTTCATGCACGAAGAGGTGACAAGAAGATACAAGCAATACCATCAACAAATGCAAATGGTGGTAACATCATTTGAGTCAGTAGCAGGTCTTAGTTCAGCTACACCATACATTTCATTGGCTCTAAAGTCACTATCAAAACACTTCAAATGCCTTAAAAATGCTATCACAGATCAACTCAAGTTTACATGTCAAGTATTGGGAGAGGATTTTTCAATACTACCAACCACCACAAGTAGTAGTAGTAAATTTGATAGCAACAATAATAACATGACAAGGCTAAGGTGCATGAGTCAAAGTTTTCAAAAGAACAAATCTGGTGGGAATAGTAATGTTGACTTTGTTGAACCTCAACAACATGTTTGGAGGCCCCAGAGAGGTTTGCCAGAACGTTCAGTGGCGATTCTTAAAGCGTGGTTGTTTGAACATTTTCTTCACCCGTACCCCACGGACACTGATAAACACATGTTGGCTAGTCAAACAGGTCTATCAAGAAACCAGGTATCAAATTGGTTCATAAATGCTAGAGTCCGTGTATGGAAACCAATGGTTGAGGAAATACACATGCTTGAATCAAAAGGAACAACAGAAGTTCAGAATCAGAACAATAGTAAAAATGAAGCATCCAATGTTAGAGCACATGAAAAACAATTTCAGTGTTTGGAAGTTGGGTCATCTTCAGGAATTAACAATGTTGAAAATGTAAGACATGAAGAGCAATGGAATAATATTCAAGAGAAGAGGTCTAAATTGGAAAATGATCAAATTACACCAAATATGGATACAACAGTGATGGGTTTTATGCCGTATCAACGCGGATCGGTATCGCTGACTTTGGGTTTGAGACACGGCGTTGAAAATGCACAACACCAACAACAGCAGTTGCAACAAGAGGTGGAGCTTAGACATCAATATGGAGGGCACATGTTCCATGATTTTGTGGGTTAA 2064 0.3566 MRPEQLHVAQQIRRDKLRIQNHMQQEFANNNIEELLSLHQPPQGFNNMDLLQLRNANNNNNMLNDDESGHYPSNQIFSTTSNPLHRNPLDYELAIAEPSSSNINRLNYYYHPNETNIIPNSFLTSHEQQQQLNSTNDVFKSPTSSEMASLMHHHHSIWGGVNSHNTNANSIVPIFHENQHQWTNNNMGSFFSDYNPQGLSLSLSSNSQSKQPSSSTSNFEQGSLNIVKPSLVSRDCVKPIHQEQQQQQPSSSSSGFRNVGPLGPFTGYATILKSSRFLKPCQELLEECCCDKNVVPKWVSRDVIGVDDESGGVVSAKGSTSNSGGTSSCSMLYGSKEKENSNGDGGIGNNFCLSSSSSSTSRPECQKNKAQLLFMHEEVTRRYKQYHQQMQMVVTSFESVAGLSSATPYISLALKSLSKHFKCLKNAITDQLKFTCQVLGEDFSILPTTTSSSSKFDSNNNNMTRLRCMSQSFQKNKSGGNSNVDFVEPQQHVWRPQRGLPERSVAILKAWLFEHFLHPYPTDTDKHMLASQTGLSRNQVSNWFINARVRVWKPMVEEIHMLESKGTTEVQNQNNSKNEASNVRAHEKQFQCLEVGSSSGINNVENVRHEEQWNNIQEKRSKLENDQITPNMDTTVMGFMPYQRGSVSLTLGLRHGVENAQHQQQQLQQEVELRHQYGGHMFHDFVG 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01582 687 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 185 576 - -
Trre7g01582 687 MobiDBLite consensus disorder prediction 202 221 - -
Trre7g01582 687 SMART prehox3 266 430 IPR006563 -
Trre7g01582 687 Coils Coil 606 626 - -
Trre7g01582 687 Gene3D - 497 559 - -
Trre7g01582 687 SMART HOX_1 494 558 IPR001356 GO:0003677
Trre7g01582 687 Pfam Homeobox KN domain 511 550 IPR008422 GO:0003677|GO:0006355
Trre7g01582 687 SUPERFAMILY Homeodomain-like 496 560 IPR009057 -
Trre7g01582 687 ProSiteProfiles 'Homeobox' domain profile. 491 554 IPR001356 GO:0003677
Trre7g01582 687 CDD homeodomain 494 555 IPR001356 GO:0003677
Trre7g01582 687 FunFam BEL1-like homeodomain protein 9 497 559 - -
Trre7g01582 687 Pfam Associated with HOX 271 429 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01582 Trre-Chr7 11995020 12002505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01582 194 564 Homeobox Transcription Factor Family AT5G02030 42.049 4.29e-74 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Trre7g01582 POX 5.5e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01582 - - tpra:123919922 1052.74