Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01512 ATGTTGGTAACACCACCATGGCTAGAACAATTATTGTCAACCACATTCTTCTCTGCTTGCAAAACTCACATCAAGGCACCCAGAAACGAATGCAACATGTATTGCCTCGAATGTAGAGAATCATTCTGTTATTGTTGTAGACAAGCTTGGCATAATGATCATCAAGTAATTCAAATAAGGAGGTCGTCTTATCATGATGTTGTGAGGGTAGCTGAGATTCAGAAGGTATTGGATATTAGTGGAGTTCAAACATATGTGATTAATAGTGCTAGAGTGATTTTCCTTAACGAGAGGCCACAAAATCAGATTAAGACAAGTAATGCTGCTATTAGTGGGAGTAAACCAAATTCACATTTGTGTGAAATATGCAAAAGATATCTATTGGACCCTTTTCGTTTTTGTTCTTTGGGTTGCAAGCTTGTAGGAATAAAGAAAAATGGGAATGCAAGCTTTGTCTTAAGCGCAAAGAAAGACGAAGAAATAGGGAATATGGATCAAGGAATGTCAAGAAGGTTGCTATCAAAGCAAGAAGACGAAGAAATATTATCATCTATGCGTGAAGGAATCCAAAAACAAGTTTACAAAAGCACGTTTTCTCCTTATTGTTCTAATAATTCATCTCAACAAGCTTGTTCAAATTCAAGGAGAAGAAAAGGAATACCTCATAGGGCACCTTTAGGTCCTTAA 687 0.3668 MLVTPPWLEQLLSTTFFSACKTHIKAPRNECNMYCLECRESFCYCCRQAWHNDHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVIFLNERPQNQIKTSNAAISGSKPNSHLCEICKRYLLDPFRFCSLGCKLVGIKKNGNASFVLSAKKDEEIGNMDQGMSRRLLSKQEDEEILSSMREGIQKQVYKSTFSPYCSNNSSQQACSNSRRRKGIPHRAPLGP 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01512 228 MobiDBLite consensus disorder prediction 205 228 - -
Trre7g01512 228 ProSiteProfiles Zinc finger B-box type profile. 20 59 IPR000315 GO:0008270
Trre7g01512 228 SUPERFAMILY B-box zinc-binding domain 20 61 - -
Trre7g01512 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 226 - -
Trre7g01512 228 Pfam PLATZ transcription factor 60 140 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01512 Trre-Chr7 11363583 11365361 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre7g01512 PLATZ 1.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01512 - - gmx:100787414 334.724