Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01507 ATGTCTCGTCGCGGTGGAGGAAACAACCCTGACAACCGCCGTAACCAACCAAAACCATCTCCGGCTCCGTCTCCTTCTGGCCGTGGCTCTGGCGGTGGACTTAACGTACGTCCTCCGGCACCGATCACGGTCACCGCTACTCCATCTGTTGCCGGCTCTAGTTCGGCTCCTCCGACTCATCCTTCTCCGGCGACGGTTTCAACCGAAACTCTGACCGCTGAAGTTCAGAAGCTTTCTCTACAGTCGGCTCCGGCGTCTCAGAAGGCGATCAGGTTTCCTAACCGTCCTGGTTATGGTCAGTTAGGGAAAAAAATTCAAGTTCGTGCTAATCATTTCCGGTTGCAAGTTGCTGATAGGGATCTACATCACTACGATGTGTCGATTTCGCCGGAAATTACTTCAAAAAAAGTGTCCAGAGATATTATCAATCAGTTGGTTAAAATGCATCGTGAGTCGGTGTTAGAGAATCGCATTCCTGCTTATGATGGTAGGAAGAGTCTGTTTACTGCTGGTCCATTACCGTTTACTTCGAAGGTTTTTGTGGTTAACTTGGTTGACGAGGATCAGGGATCCTCTTCTGGTTCTGATAGGAAAAAGCGTGAACGGGAGTTTAAGGTTACGATTCGGTTTGCTTCAAAGACGGACATTGTCCATCTTACTCAGTTTCTCCGCCGTTTGCAGCCGGATTGTCCTTATGAAACCATACAAGTTCTTGATGTTGCGTTGAGGGCGACTCCAGCTGAAAAGTACACTGTTGCAGGGAGGTCATTTTTCTCACCCAGTTTGGGGGCACCTGGGCCTCTTGGCGGTGGAACAGAATATTGGAGAGGCTTTTATCAAAGCCTTAGGCCAGCACAAATGGGGCTATCACTCAACATTGATGTATCTTCAAGGGCTTTCTACGAACCGGTTCTCGTGACTGAATTTATTTCTAAAAATTTTAGATTGAATTTTTCAAGGCAGCTGTCTGACCAAGACCGTCTCAAGATCAAGAGAGCCTTGAGAGGTCTTAAGGTACGGCTATCTCATGGAGCGGGAACCAGGAGTTGCAAGGTGACCGGTGTCTCAAAAGAGCCACTCAAAGACCTAACGTTCACATTGGAAGACAAAGTAACTAGGAAAAGAGTTGTGGATTATTTTTATGAGAAATACAAAATTGAGTTAAAGTATCCACATCTTCCTGCTATCCAATCTGGAAGTGACGCAAGACCTATGTATTTTCCAATGGAGCTTTGTCAAATTGAGGCTGGACAAAGGTACTCCAAAAGATTGAATGAAGAGCAAGTAACTAACCTTCTAAGGGCAACGTGCCAGCGTCCTAATCAGAGAGAACAAGATATTCAAAATATTGTGAAGCAGCACCGCTTCAACTCAGACAAGGTTGTTGCTGAATTTGGGATCAATGTAACAGAGGATCTCACTCTGGTTGATGCTCGTGTTTTGCCACCCCCCACGCTTAAATATTATGGAACTGGTGGACAATCAAAGCTTGACCCTCGAATGGGTCAATGGAATATGATCAGTAAGAAAATGGTTGATGGTGGCAATGTTCAATTTTGGAGTTGCCTCTGCTTTTCAGGAATGGACCCAACTCTGTTTTGCGAAGAGTTGGTTAGTATGTGTCGAGCCAAGGGACTGGTTTTCAACCCAGAACCTGCTGTACCTTTATCCCCAGGCAATCCTAGTCAAATTGAGAAAGAACTTGTGAATTTTAACAAGCGGTGTAGGGCAGTACTTGATAGCAAACAACAGAGGCTTCAGTTGCTGATAATAATTTTGCCTGATCGCAAGCTTGCGGGGACTTATGATAAAATAAAGCGTGTATGTGAAACTGAACTGGGAATTGTTTCTCAATGTGTTCAGCCAAAGCAAGCTCAAAAGTTGCAAAAGCAGTATCTTGAAAATTTGTCCTTAAAGATTAATGTCAAGGTTGGTGGTCGTAACACCGTCTTGAATGATGCATTTGAGAGAAGAATTCCTCTTGTAACTGATAAACCAACTATAATATTTGGTGCGGATGTAACACATCCACAGCCAGGGGAAGACTCCAGTCCCTCTATAGCTGCCGTGGTGGCATCCATGGATTGGCCTTGGGTCACCAAGTACAGGGGAGTTTTTTCTGCCCAGTCTCATCGGGAAGAAATTATTCAGGATCTGTATAAAACCGTAGAACATCCTCAGAAGGGGATTTTGCATACTGGAATGATAAGGGAGCTAATTATATCTTTCTACAAGTCAACTGGGCGTAAGCCTGAGAGGATTATATTTTACAGAGATGGAGTAAGTGAAGGGCAGTTTAATCAGGTTTTGCTTTATGAGATGGATGCAATCCGAAAGGCTTGTGTCTCAATAGAGAATGGGTATCTACCTCCAGTTACTTTTGTGGTGGTCCAAAAGAGACATCATACCCGCCTCTTTCCTGTCAAAAAGGAAGAGACAGACAGAAGTGGAAATATAATGCCAGGAACTGTGGTCGACACCAGCATTTGCCACCCCAGAGAATTTGATTTTTATCTGAACAGCCATGCTGGGATTCAAGGTACTAGTCGACCAGCTCATTATCATGTGTTGTTTGATGAAAATCGTTTCACTGCAGATCAGTTACAGAGTTTGACCAATAACTTGTGTTACACTTATGCTAGATGTACTCGATCTGTGTCAATAGTTCCTCCTGCATATTATGCGCACTTGTTAGCTTTCCGAGCTCGCTACTACCTTAGCGACGCTGCTGCTGATTCTGATTCTGGTTCTGCAAGTGGTACTAGGAGTGCCACCAACGTTGTAGCAGCACTTCCCTCACTCATTGAAAGTGTCAAAGACAACATGTTTTATGTTTGA 2838 0.445 MSRRGGGNNPDNRRNQPKPSPAPSPSGRGSGGGLNVRPPAPITVTATPSVAGSSSAPPTHPSPATVSTETLTAEVQKLSLQSAPASQKAIRFPNRPGYGQLGKKIQVRANHFRLQVADRDLHHYDVSISPEITSKKVSRDIINQLVKMHRESVLENRIPAYDGRKSLFTAGPLPFTSKVFVVNLVDEDQGSSSGSDRKKREREFKVTIRFASKTDIVHLTQFLRRLQPDCPYETIQVLDVALRATPAEKYTVAGRSFFSPSLGAPGPLGGGTEYWRGFYQSLRPAQMGLSLNIDVSSRAFYEPVLVTEFISKNFRLNFSRQLSDQDRLKIKRALRGLKVRLSHGAGTRSCKVTGVSKEPLKDLTFTLEDKVTRKRVVDYFYEKYKIELKYPHLPAIQSGSDARPMYFPMELCQIEAGQRYSKRLNEEQVTNLLRATCQRPNQREQDIQNIVKQHRFNSDKVVAEFGINVTEDLTLVDARVLPPPTLKYYGTGGQSKLDPRMGQWNMISKKMVDGGNVQFWSCLCFSGMDPTLFCEELVSMCRAKGLVFNPEPAVPLSPGNPSQIEKELVNFNKRCRAVLDSKQQRLQLLIIILPDRKLAGTYDKIKRVCETELGIVSQCVQPKQAQKLQKQYLENLSLKINVKVGGRNTVLNDAFERRIPLVTDKPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPWVTKYRGVFSAQSHREEIIQDLYKTVEHPQKGILHTGMIRELIISFYKSTGRKPERIIFYRDGVSEGQFNQVLLYEMDAIRKACVSIENGYLPPVTFVVVQKRHHTRLFPVKKEETDRSGNIMPGTVVDTSICHPREFDFYLNSHAGIQGTSRPAHYHVLFDENRFTADQLQSLTNNLCYTYARCTRSVSIVPPAYYAHLLAFRARYYLSDAAADSDSGSASGTRSATNVVAALPSLIESVKDNMFYV 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01507 945 Gene3D paz domain 298 420 - -
Trre7g01507 945 ProSiteProfiles Piwi domain profile. 588 907 IPR003165 GO:0003676
Trre7g01507 945 MobiDBLite consensus disorder prediction 1 15 - -
Trre7g01507 945 MobiDBLite consensus disorder prediction 46 70 - -
Trre7g01507 945 SMART DUF1785_2 251 303 IPR014811 -
Trre7g01507 945 Pfam PAZ domain 325 433 IPR003100 GO:0005515
Trre7g01507 945 Pfam N-terminal domain of argonaute 103 242 IPR032474 -
Trre7g01507 945 CDD Piwi_ago-like 460 906 IPR045246 -
Trre7g01507 945 SMART Piwi_a_2 588 907 IPR003165 GO:0003676
Trre7g01507 945 Pfam Piwi domain 589 905 IPR003165 GO:0003676
Trre7g01507 945 Pfam Argonaute linker 2 domain 442 488 IPR032472 -
Trre7g01507 945 Pfam Argonaute linker 1 domain 254 302 IPR014811 -
Trre7g01507 945 CDD PAZ_argonaute_like 306 414 - -
Trre7g01507 945 MobiDBLite consensus disorder prediction 1 70 - -
Trre7g01507 945 SUPERFAMILY PAZ domain 104 457 IPR036085 GO:0005515
Trre7g01507 945 FunFam protein argonaute 10-like 658 945 - -
Trre7g01507 945 Gene3D - 480 653 - -
Trre7g01507 945 SUPERFAMILY Ribonuclease H-like 577 908 IPR012337 -
Trre7g01507 945 ProSiteProfiles PAZ domain profile. 304 416 IPR003100 GO:0005515
Trre7g01507 945 SMART PAZ_2_a_3 304 435 IPR003100 GO:0005515
Trre7g01507 945 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 85 908 - -
Trre7g01507 945 Gene3D - 659 945 IPR036397 GO:0003676
Trre7g01507 945 FunFam Argonaute 10 480 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01507 Trre-Chr7 11299272 11304737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01507 39 944 Eukaryotic Initiation Factors Gene Family AT1G48410 55.139 0.0 1014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01507 K11593 - gmx:100799033 1196.03