Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01505 ATGGAGAGAAAAGGGATCAACAATGATTACACTTCAGAAGACGAAGGAACTGAACACTATAGGCGTGGTGGTTACCATGCGGTTCAAATTGCTGATACTTTCAACAATGCTCGTTATGTTATTCAATCTAAGCTTGGTTGGGGTCATTTTTCCACTGTTTGGCTTGCTTGGGATACTCTCAAATCGCGTTATGTGGCCCTTAAAATTCAAAAGAGCGCACAGCACTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAAGTTGAAGAGGGAGACCCTGATGATAAGAAATGTGTTGTGAAGCTTTTGGATCACTTTAAGCATTCAGGGCCTAATGGTATACATGTGTGTATGGTTTTTGAATTCCTTGGTGATAATCTTCTCACCCTTATCAAATATAGTGACTATCGTGGAGTTCCTCTTTCCATGGTTAAAGAAATATGTTTTCATATTTTGGTGGGCTTGGATTATTTGCACCGCGAGCTTTCTATCATACACACTGACTTGAAACCAGAGAATGTGTTGCTTCATTCACTGATAGATCCGTGTAAGGATCCAAGGAAATCAGGTGCTCCACTTATCCTTCCAAACACCAAGGATAAGACTTTGTCTAATAATGGCACTATCCAAAACAGTAAAATTGGAAATGGAGATTCAACAAAGAACCAGAAGAAGAAAATGCAGGGAAACGCTAGGAGGGTGGCTCAAGGCTGTATTGAGAAGGGAAGTCCAGAGGAAGCTGCGGAGGACTTTAAAGAACCCGAGCACGGAAATCGTAAAAATCATGCGAAATCAAGTGTAGAATCTTCTGAAAATATACCCAATAGTTCTTTCAGTGAGGGTGAGTCAACACAAACTTTTGAAAAGGATGTTGCACAAGGAAATCATGGTCATAGGAAAGGTAGCCGGTCCATGAGAAAGAAGCTGCTGGCAGCTGTTGATCTTAAATGCAAGCTGGTTGATTTTGGTAATGCTTGTTGGACTTATAAACAGTTCACAAATGATATTCAGACAAGGCAATATAGGTGTCCCGAGGTTCTTCTTGGATCTAAATACTCTACTCCGGCAGATATGTGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACCGGAGATGTTCTTTTTGATCCTCATAGTGGAGACAACTATGATAAGGATGAGGATCATCTGGCATTGATGATGGAACTTCTTGGAAAGATGCCTAGCAAGATTGCACTTGGTGGTCGCTATTCCCGAGAATTTTTTAATCGACATGGTGAATTGAGGCACATCCGTGACTTGCGATTCTGGCCACATCATAAGATTCTGACGGAAAAGTATAATTTCAGTGAACAAGATGCAAATGACATGGCTGACTTCCTTCGTCCAATACTTGATTTTGACCCTGAAAAGAGACCAACAGCTGCTCAGTGCCTTAGCCATCCATGGTTCAGTGCAGGACCCAGAACTCTCGAGCCCTCACTGACTACTATGCAACCTGATGGAATCAACAGGGATTCATTTGAAAAGAGAAATAAGAAAAAGGAAAAGGCTGAGCATGAGTTGGTGGAACTTGGTGTGAAGAATATAGCCATTGATGGATCTCCTGTGTCACTCAAAGACTCCCAACCTGTAAAGTCATCAACATAG 1635 0.4165 MERKGINNDYTSEDEGTEHYRRGGYHAVQIADTFNNARYVIQSKLGWGHFSTVWLAWDTLKSRYVALKIQKSAQHYTEAAMDEIKILKQVEEGDPDDKKCVVKLLDHFKHSGPNGIHVCMVFEFLGDNLLTLIKYSDYRGVPLSMVKEICFHILVGLDYLHRELSIIHTDLKPENVLLHSLIDPCKDPRKSGAPLILPNTKDKTLSNNGTIQNSKIGNGDSTKNQKKKMQGNARRVAQGCIEKGSPEEAAEDFKEPEHGNRKNHAKSSVESSENIPNSSFSEGESTQTFEKDVAQGNHGHRKGSRSMRKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADMWSFACICFELATGDVLFDPHSGDNYDKDEDHLALMMELLGKMPSKIALGGRYSREFFNRHGELRHIRDLRFWPHHKILTEKYNFSEQDANDMADFLRPILDFDPEKRPTAAQCLSHPWFSAGPRTLEPSLTTMQPDGINRDSFEKRNKKKEKAEHELVELGVKNIAIDGSPVSLKDSQPVKSST 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01505 544 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 11 511 - -
Trre7g01505 544 SUPERFAMILY Protein kinase-like (PK-like) 34 491 IPR011009 -
Trre7g01505 544 ProSiteProfiles Protein kinase domain profile. 39 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01505 544 ProSitePatterns Protein kinases ATP-binding region signature. 45 68 IPR017441 GO:0005524
Trre7g01505 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Trre7g01505 544 CDD STKc_SRPK 28 479 - -
Trre7g01505 544 Gene3D Transferase(Phosphotransferase) domain 1 122 480 - -
Trre7g01505 544 FunFam Serine/threonine-protein kinase SRPK-like protein 309 479 - -
Trre7g01505 544 FunFam CMGC/SRPK protein kinase 25 124 - -
Trre7g01505 544 SMART serkin_6 39 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01505 544 MobiDBLite consensus disorder prediction 196 307 - -
Trre7g01505 544 MobiDBLite consensus disorder prediction 269 293 - -
Trre7g01505 544 MobiDBLite consensus disorder prediction 245 268 - -
Trre7g01505 544 Gene3D Phosphorylase Kinase; domain 1 15 121 - -
Trre7g01505 544 MobiDBLite consensus disorder prediction 200 226 - -
Trre7g01505 544 Pfam Protein kinase domain 39 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01505 544 Pfam Protein kinase domain 316 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01505 Trre-Chr7 11279917 11283978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01505 8 530 EF-hand Containing Proteins AT5G22840 66.920 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Trre7g01505 Pkinase 6.9e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01505 K08832 - gmx:100790060 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03691 11 50145434 50149312 Trre7g01505 7 11279917 11283978 PCT