Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01489 ATGGAAGCACCAATGGAGTTTTGGGGTGCTGAGGTTAAAGTTGGACAATCTGTTAAAGTTGATCCAGATGATGAACAATATGAGGGATATATCCACATTTCTCAGGTTGCACTCGGTGAAGTGAAGAAAGGCAAAGCAACTGAACCTGTTGTTGTGTATGTGAAAGTTGATGATCAGAAGCTTGTTCTGGGAACTCTTATTAAGGATGAAATTCCTCAGATATCTTTGGATATAGTTCTAGAAAAGGAGGCTGAACTTTCCCACAACTCAAAAAATGCTGCTGTCTATTTTTCTGGATACAAAGTTTTTCGTGGCATGGATGAAGATGATGAAGACGCTGACCTTTCTGATAGTGATGGTGAACTTGCTCCTATGAGGGAACGTGTTGAAGCTGCAAAGGAGCTTGCTAAATCTGGAAAACCTGCTGGTGCAGTGGCAAAGCAAGTCAAGATAATTGATCCAACGAGTGGTAAGACTGTTGACCCGGAGGAGATTAAAGACTTATCTGGTGATGAATCAGATTCTGATTTTTCTGAGGAGTTCAATTCTGATAGTGAGGACGGTGAAAGTGAAGAAGAGGGTTTAATGGTGGATCAGGGCAAGAAGAACAAGGGAACAAATGAGAATGCACCAAAAGCTCCAGTTCCTACCAAGAAGGCTAAAATTGCTACTCCTGAAAAGACTGATTCTGATGTTGATTCCAGTGATGAAGATATTAGTGATGAAGACATTAGCGATGAAGATATTAGTGATGATGATAGTAGTGATGAAGAAACTCCTGTTCAGAAGGGCAAGAACAACAAGAGACCAAATGAGGCTGGACCACAAACTCCAGTTTCTGCCAAGAAAGCTAAAAATGCTACTCCTGGGAAGAGTGGTGATGGTAAAAAAGGTGTACACATAGCCACTCCCCATCCTATGAAGAAAGCTGGAAAAACTCCTCAGAATGTTGCTAAGAACCAGTCTCCCAGTTCTAACAAGCCTAAAAAGTCCAACCAAGGTCGTCGTTGA 1011 0.4164 MEAPMEFWGAEVKVGQSVKVDPDDEQYEGYIHISQVALGEVKKGKATEPVVVYVKVDDQKLVLGTLIKDEIPQISLDIVLEKEAELSHNSKNAAVYFSGYKVFRGMDEDDEDADLSDSDGELAPMRERVEAAKELAKSGKPAGAVAKQVKIIDPTSGKTVDPEEIKDLSGDESDSDFSEEFNSDSEDGESEEEGLMVDQGKKNKGTNENAPKAPVPTKKAKIATPEKTDSDVDSSDEDISDEDISDEDISDDDSSDEETPVQKGKNNKRPNEAGPQTPVSAKKAKNATPGKSGDGKKGVHIATPHPMKKAGKTPQNVAKNQSPSSNKPKKSNQGRR 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01489 336 MobiDBLite consensus disorder prediction 231 255 - -
Trre7g01489 336 MobiDBLite consensus disorder prediction 134 336 - -
Trre7g01489 336 FunFam Histone deacetylase HDT1 5 105 - -
Trre7g01489 336 SUPERFAMILY Nucleoplasmin-like core domain 5 80 IPR036824 -
Trre7g01489 336 Gene3D Nucleoplasmin core domain 2 104 - -
Trre7g01489 336 Pfam Nucleoplasmin-like domain 7 101 IPR041232 -
Trre7g01489 336 MobiDBLite consensus disorder prediction 314 329 - -
Trre7g01489 336 MobiDBLite consensus disorder prediction 167 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01489 Trre-Chr7 11029890 11033610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01489 5 101 C2H2 Transcription Factor Family AT3G44750 53.061 2.48e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01489 - - psat:127103750 301.982