Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01476 ATGGAAAATCACAAGACACCATTTTCCCTATGTCTTGATACAAAGGATGTTGTGATTGTTAAACCCTCCAAGCCCACACCTTCTGAAATTCTTTCCCTCTCCACCATTGACAATGATCCTAACATCAACATTCTTTGCCAAACCATTTATGTCTACAAAGCAAATCATGATTTTACAAATGACCAAAAAGACCCTGCATGTGTAATCAAAGAAGCACTCTCAAAGGCTTTAGTTTACTATTATCCTCTTGCAGGCAAGATAACAACACTTGCTGATGAAAAACTTGGAATCAACTGCAACGGCGACGGAGTTCCATTCTTAGAATCAAATGCTAATTGTGAACTCTCTTCTCTTCATTATCTTGAAGGGATTGATGTTCCAACAGCACAAAAACTTGTGTTTGATAACCCTTCACAAGACCAAACTAGTCCTCATCCTTTGGTTTTTAAGGTGACAAAGTTTCTTTGTGGTGGTTTCACTATTGGAATGGGATTGTCACATAGTGTTTGTGATGGTTTTGGTGCATCAAAATTCTATAGAGCACTTGTTGAACTTGCAAGTGGAAAAAATGAACCTTCTTTGAAACCTATTTGGGAGAGAGAGAGACTAATAGGAAAAAGTGATCTTAAGGAAGAACCATTCAAATTTCTTATAGATAAAACATCATTAGCAACTTCACCTTTTTTACCAACAAAAGAAATTTCACATGAATGTTTTAGCTTAAATGGTGAAACTATAAAAATGCTAAAAATCAAACTAATGAAGGAAAGTGGTGATGATAATATGATGAAAGAAAGTTTCACAACACTTGAAACACTTGGTGCATATGTTTGGAGATCAAAAGTTAGAGCTTTGAAATTGAATAATGATGGAAAAACTATTTTTTGTTTAGCAATAGGTGTGAGAAAACTATTGGATCCACCTTTGCATGAAGGGTATTATGGTAATGCTTTTGTAGCTTCAAATGTTGTGTTAAAAGTGAAAGAGCTTAATGAAAAACCACTTTTTGAAGTTGTGAAGCTTATCAAAGAGAGTAAAAAACTTGCTTTAAATAATGAATATATAAGAAATTCAATTAACATGTTAGAGACAATGAGGAAAGGGAAGATTAAGATTGAAGGAACAGGTGCATCATTGGTTTTAACTGATTGGAGACAACTTGGTTTGTTACAAGAAGTTGATTTTGGATGGAAGAGTTCAGTGAATATTGTTCCTGTTCCTTGGAACATGTTTGGTTTTGTGGATTTGTGTCTTTTTTTGCCTCCAAGTAACTTGAATCCCTTAATGAAAGATGGAGTTAGGATCTTTGTGTCACTTCCAAAAGCTTCAATGGCTAAGTTCAATGAGGAGATGGAGTTCCTTAAGGTCATGAAAGTTGATGAAAGCTAG 1389 0.347 MENHKTPFSLCLDTKDVVIVKPSKPTPSEILSLSTIDNDPNINILCQTIYVYKANHDFTNDQKDPACVIKEALSKALVYYYPLAGKITTLADEKLGINCNGDGVPFLESNANCELSSLHYLEGIDVPTAQKLVFDNPSQDQTSPHPLVFKVTKFLCGGFTIGMGLSHSVCDGFGASKFYRALVELASGKNEPSLKPIWERERLIGKSDLKEEPFKFLIDKTSLATSPFLPTKEISHECFSLNGETIKMLKIKLMKESGDDNMMKESFTTLETLGAYVWRSKVRALKLNNDGKTIFCLAIGVRKLLDPPLHEGYYGNAFVASNVVLKVKELNEKPLFEVVKLIKESKKLALNNEYIRNSINMLETMRKGKIKIEGTGASLVLTDWRQLGLLQEVDFGWKSSVNIVPVPWNMFGFVDLCLFLPPSNLNPLMKDGVRIFVSLPKASMAKFNEEMEFLKVMKVDES 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01476 462 Gene3D - 229 451 IPR023213 -
Trre7g01476 462 Gene3D - 12 214 IPR023213 -
Trre7g01476 462 Pfam Transferase family 15 453 - -
Trre7g01476 462 PANTHER ACYL TRANSFERASE 4 15 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01476 Trre-Chr7 10903267 10904655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01476 12 414 Monolignol Biosynthesis Gene Families AT5G48930 27.446 2.36e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01476 K20240 - gmx:100801843 696.041