Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre7g01446 | ATGGCGGAAGAACATAGATGTCAAGCTCAACGTCTCTGTGCTAACAATTGCGGTTTCTTTGGTATTCCAGCCATGCAAGATCTTTGTTCCAAATGTTACCGTGATTTGCAATTGAAGGAACAACGTTCTTCTTCTGCGAAATTGGTTCTTAATAAAACGCTAATTTCTCAATCTCAACCGTTGATTTCTGTTTCTGAAACTGTATCGTCTTCACCGTTGGTGGTTGATTCTTCTACTTTAGCGGTGGAATCGGTTGAGACGGCGGCAGCGATGGTTGTTCAGCCGAATCGGTGTGGGACTTGTAGGCGGCGCGTGGGGTTGACAGGATTTAAATGCAGATGCGGATTGACGTTGTGTGGGTCCCACAGGTTTCCGGAGATGCATGAATGTGGATTTGATTTTAAGGGAATGGGAAGAGAGATGATTGCGAAAGCGAATCCTGTGGTGAAGGGAGAGAAACTCAATAAGATTTGA | 474 | 0.4494 | MAEEHRCQAQRLCANNCGFFGIPAMQDLCSKCYRDLQLKEQRSSSAKLVLNKTLISQSQPLISVSETVSSSPLVVDSSTLAVESVETAAAMVVQPNRCGTCRRRVGLTGFKCRCGLTLCGSHRFPEMHECGFDFKGMGREMIAKANPVVKGEKLNKI | 157 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre7g01446 | 157 | Pfam | AN1-like Zinc finger | 98 | 134 | IPR000058 | GO:0008270 | |
Trre7g01446 | 157 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 10 | 157 | - | - | |
Trre7g01446 | 157 | Pfam | A20-like zinc finger | 11 | 34 | IPR002653 | GO:0003677|GO:0008270 | |
Trre7g01446 | 157 | ProSiteProfiles | Zinc finger A20-type profile. | 7 | 41 | IPR002653 | GO:0003677|GO:0008270 | |
Trre7g01446 | 157 | ProSiteProfiles | Zinc finger AN1-type profile. | 92 | 138 | IPR000058 | GO:0008270 | |
Trre7g01446 | 157 | Gene3D | - | 75 | 153 | IPR035896 | - | |
Trre7g01446 | 157 | SMART | AN1_Zf_4 | 98 | 135 | IPR000058 | GO:0008270 | |
Trre7g01446 | 157 | Gene3D | - | 1 | 70 | - | - | |
Trre7g01446 | 157 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 12 | 59 | - | - | |
Trre7g01446 | 157 | FunFam | Zinc finger AN1-type containing 6 | 73 | 153 | - | - | |
Trre7g01446 | 157 | SMART | A20_3 | 10 | 34 | IPR002653 | GO:0003677|GO:0008270 | |
Trre7g01446 | 157 | SUPERFAMILY | AN1-like Zinc finger | 91 | 152 | IPR035896 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre7g01446 | Trre-Chr7 | 10652111 | 10652584 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre7g01446 | 1 | 157 | C2H2 Transcription Factor Family | AT3G52800 | 47.647 | 1.62e-42 | 137 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre7g01446 | - | - | gmx:100807363 | 219.935 |