Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01446 ATGGCGGAAGAACATAGATGTCAAGCTCAACGTCTCTGTGCTAACAATTGCGGTTTCTTTGGTATTCCAGCCATGCAAGATCTTTGTTCCAAATGTTACCGTGATTTGCAATTGAAGGAACAACGTTCTTCTTCTGCGAAATTGGTTCTTAATAAAACGCTAATTTCTCAATCTCAACCGTTGATTTCTGTTTCTGAAACTGTATCGTCTTCACCGTTGGTGGTTGATTCTTCTACTTTAGCGGTGGAATCGGTTGAGACGGCGGCAGCGATGGTTGTTCAGCCGAATCGGTGTGGGACTTGTAGGCGGCGCGTGGGGTTGACAGGATTTAAATGCAGATGCGGATTGACGTTGTGTGGGTCCCACAGGTTTCCGGAGATGCATGAATGTGGATTTGATTTTAAGGGAATGGGAAGAGAGATGATTGCGAAAGCGAATCCTGTGGTGAAGGGAGAGAAACTCAATAAGATTTGA 474 0.4494 MAEEHRCQAQRLCANNCGFFGIPAMQDLCSKCYRDLQLKEQRSSSAKLVLNKTLISQSQPLISVSETVSSSPLVVDSSTLAVESVETAAAMVVQPNRCGTCRRRVGLTGFKCRCGLTLCGSHRFPEMHECGFDFKGMGREMIAKANPVVKGEKLNKI 157
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01446 157 Pfam AN1-like Zinc finger 98 134 IPR000058 GO:0008270
Trre7g01446 157 PANTHER AN1-TYPE ZINC FINGER PROTEIN 10 157 - -
Trre7g01446 157 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Trre7g01446 157 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Trre7g01446 157 ProSiteProfiles Zinc finger AN1-type profile. 92 138 IPR000058 GO:0008270
Trre7g01446 157 Gene3D - 75 153 IPR035896 -
Trre7g01446 157 SMART AN1_Zf_4 98 135 IPR000058 GO:0008270
Trre7g01446 157 Gene3D - 1 70 - -
Trre7g01446 157 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 59 - -
Trre7g01446 157 FunFam Zinc finger AN1-type containing 6 73 153 - -
Trre7g01446 157 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Trre7g01446 157 SUPERFAMILY AN1-like Zinc finger 91 152 IPR035896 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre7g01446 Trre-Chr7 10652111 10652584 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01446 1 157 C2H2 Transcription Factor Family AT3G52800 47.647 1.62e-42 137
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01446 - - gmx:100807363 219.935