Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01438 ATGGCTAGCCAAAGAATTGGAGAAATTGGTTTATCTGAGTTAGGACCTTCAAGTCAACATGTCCCTTATGGAGTTCTTCATGGAATTACTACCTCAACATCAACCTTAATGAATCAAGGGTCTGCTTTTGATTTTGGAGAGCTTGAAGAGGCAATTGTTCTTCAAGGAATTAAGATAAGAAATGATGAAGGAAAAGCACCTATATTCACAAGTAAACCAGCAGCTACACTTGAAATGTTTCCTTCTTGGCCAATTAGATTCCAACAAACACCAAGAGTTATAGCTTCTCTCACTTCTCCATCTTTGACTAATCCATATGGAGGTTCAAAGTCAGGAGGGGAAAGCACTGATTCAGGATCAACAGAGTTACAATTTGAAACAGATTCTCCAATAAGTGGAAATGTAAAAGCATCTTCATCAGATCATCATAATAATAATCATGCTTTTGATCAACAACTTCAGCAGGAGACAGGAACTGATAATGGCTTAAGAACAGGAACATCACAGAATCAATCAAAAGCTAAATCACATCATGAAAAGAAAAAAGGGGTTGCTTCCACATCAGAAAAGACACTTGATCCAAAGACACTGAGACGTTTGGCACAAAATAGAGAAGCTGCAAAGAAAAGTCGTCTAAGAAAAAAGGCTTATGTGCAGCAGCTAGAGACAAGTAGATTAAGGCTATCCAATCTAGAACAGGACCTTCAAAGAGCACGCTCTCAGGGACTATTCTTGGGTTGTGGTGGTGGCAATATAAGCCCCGGAGCTGCAATGTTTGACATGGAGTATGCAAGATGGCTTGAAGAAGATCAACGACACTTGGCAGAAATTCGAGCCGCGCTGCAGGCGGCATTACCGGATAACGAACTTAGAGTGATTGTTGACGGATATTTGTATCATTATGATGAGCTTTTTCGATTGAAGGGTGTGGCTGTTAAATCAGATGTGTTTCACCTCATTAAAGGCATTTGGGCTTCTCCCGCTGAACGACCCTTCATTTGGATAGGTGGTTTCAAACCCTCGGAGCTCATCACGATGTTGACACAACAGTTGGAGCCCCTAGCGGACCAGCAAATAGAAGGGATAATGGCTCTACGGCAATCATCACATCAAGCAGAAGAAGCTTTTACTCAAGGCCATGAACAGCTCCACCACGCTATTGTTGACACCATCGCCGGAGGAGCCGTCATTGACGGTGTGCAACAAATGGTTGCCGCCATGGCCAGAATTTCCAACCTTGAAGGATTTGTCCATCAGGCTGATAATTTGAGGCAACAAACTCTTCATCAACTATGTCGAATACTCACAGTACGTCAAGCAGCGCGGTGTTTCCTTGTTATTGGAGAGTATTATGGACGTCTTCGGGCTCTTAGTTCTCTTTGGGCTTCAAGACCACGAGAGAACATGATGATAGATGATAATTCATGCCAAACTACCACAGAATTGCAAATGGTTCAACCTTCTCAAAGTCATTTCTCAAGTTTCTGA 1488 0.4227 MASQRIGEIGLSELGPSSQHVPYGVLHGITTSTSTLMNQGSAFDFGELEEAIVLQGIKIRNDEGKAPIFTSKPAATLEMFPSWPIRFQQTPRVIASLTSPSLTNPYGGSKSGGESTDSGSTELQFETDSPISGNVKASSSDHHNNNHAFDQQLQQETGTDNGLRTGTSQNQSKAKSHHEKKKGVASTSEKTLDPKTLRRLAQNREAAKKSRLRKKAYVQQLETSRLRLSNLEQDLQRARSQGLFLGCGGGNISPGAAMFDMEYARWLEEDQRHLAEIRAALQAALPDNELRVIVDGYLYHYDELFRLKGVAVKSDVFHLIKGIWASPAERPFIWIGGFKPSELITMLTQQLEPLADQQIEGIMALRQSSHQAEEAFTQGHEQLHHAIVDTIAGGAVIDGVQQMVAAMARISNLEGFVHQADNLRQQTLHQLCRILTVRQAARCFLVIGEYYGRLRALSSLWASRPRENMMIDDNSCQTTTELQMVQPSQSHFSSF 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01438 495 MobiDBLite consensus disorder prediction 158 172 - -
Trre7g01438 495 FunFam BZIP family transcription factor 194 243 - -
Trre7g01438 495 ProSiteProfiles DOG1 domain profile. 256 464 IPR025422 GO:0006351|GO:0043565
Trre7g01438 495 CDD bZIP_HBP1b-like 195 246 - -
Trre7g01438 495 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 193 237 IPR004827 GO:0003700|GO:0006355
Trre7g01438 495 MobiDBLite consensus disorder prediction 98 146 - -
Trre7g01438 495 Coils Coil 214 241 - -
Trre7g01438 495 MobiDBLite consensus disorder prediction 181 197 - -
Trre7g01438 495 MobiDBLite consensus disorder prediction 158 197 - -
Trre7g01438 495 Pfam Seed dormancy control 273 348 IPR025422 GO:0006351|GO:0043565
Trre7g01438 495 SMART brlzneu 191 253 IPR004827 GO:0003700|GO:0006355
Trre7g01438 495 Pfam bZIP transcription factor 195 236 IPR004827 GO:0003700|GO:0006355
Trre7g01438 495 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 198 213 IPR004827 GO:0003700|GO:0006355
Trre7g01438 495 SUPERFAMILY Leucine zipper domain 195 237 IPR046347 GO:0003700|GO:0006355
Trre7g01438 495 PANTHER TRANSCRIPTION FACTOR TGA9 138 467 - -
Trre7g01438 495 Gene3D - 194 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01438 Trre-Chr7 10577080 10584229 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01438 142 495 bZIP Transcription Factor Family AT1G08320 64.706 3.97e-165 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre7g01438 DOG1 2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01438 K14431 - gmx:100101904 693.345