Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01437 ATGGCTAGCCAAAGAATTGGAGAAATTGGTTTATCTGAGTTAGGACCTTCAAGTCAACATGTCCCTTATGGAGTTCTTCATGGAATTACTACCTCAACATCAACCTTAATGAATCAAGGGTCTGCTTTTGATTTTGGAGAGCTTGAAGAGGCAATTGTTCTTCAAGGAATTAAGATAAGAAATGATGAAGGAAAAGCACCAGCTATATTCACAAGTAAACCAGCAGCTACACTTGAAATGTTTCCTTCTTGGCCAATTAGATTCCAACAAACACCAAGAGTTATAGCTTCTCTCACTTCTCCATCTTTGACTAATCCATATGGAGGTTCAAAGTCAGGAGGGGAAAGCACTGATTCAGGATCAACAGAGTTACAATTTGAAACAGATTCTCCAATAAGTGGAAATGTAAAAGCATCTTCATCAGATCATCATAATAATAATCATGCTTTTGATCAACAACTTCAGCAGGAGACAGGAACTGATAATGGCTTAAGAACAGGAACATCACAGAATCAATCAAAAGCTAAATCACATCATGAAAAGAAAAAAGGGGTTGCTTCCACATCAGAAAAGACACTTGATCCAAAGACACTGAGACGTTTGGCACAAAATAGAGAAGCTGCAAAGAAAAGTCGTCTAAGAAAAAAGGCTTATGTGCAGCAGCTAGAGACAAGTAGATTAAGGCTATCCAATCTAGAACAGGACCTTCAAAGAGCACGCTCTCAGGGACTATTCTTGGGTTGTGGTGGTGGCAATATAAGCCCCGGAGCTGCAATGTTTGACATGGAGTATGCAAGATGGCTTGAAGAAGATCAACGACACTTGGCAGAAATTCGAGCCGCGCTGCAGGCGGCATTACCGGATAACGAACTTAGAGTGATTGTTGACGGATATTTGTATCATTATGATGAGCTTTTTCGATTGAAGGGTGTGGCTGTTAAATCAGATGTGTTTCACCTCATTAAAGGCATTTGGGCTTCTCCCGCTGAACGACCCTTCATTTGGATAGGTGGTTTCAAACCCTCGGAGCTCATCACGATGTTGACACAACAGTTGGAGCCCCTAGCGGACCAGCAAATAGAAGGGATAATGGCTCTACGGCAATCATCACATCAAGCAGAAGAAGCTTTTACTCAAGGCCATGAACAGCTCCACCACGCTATTGTTGACACCATCGCCGGAGGAGCCGTCATTGACGGTGTGCAACAAATGGTTGCCGCCATGGCCAGAATTTCCAACCTTGAAGGATTTGTCCATCAGGCTGATAATTTGAGGCAACAAACTCTTCATCAACTATGTCGAATACTCACAGTACGTCAAGCAGCGCGGTGTTTCCTTGTTATTGGAGAGTATTATGGACGTCTTCGGGCTCTTAGTTCTCTTTGGGCTTCAAGACCACGAGAGAACATGATGATAGATGATAATTCATGCCAAACTACCACAGAATTGCAAATGGTTCAACCTTCTCAAAGTCATTTCTCAAGTTTCTGA 1491 0.4232 MASQRIGEIGLSELGPSSQHVPYGVLHGITTSTSTLMNQGSAFDFGELEEAIVLQGIKIRNDEGKAPAIFTSKPAATLEMFPSWPIRFQQTPRVIASLTSPSLTNPYGGSKSGGESTDSGSTELQFETDSPISGNVKASSSDHHNNNHAFDQQLQQETGTDNGLRTGTSQNQSKAKSHHEKKKGVASTSEKTLDPKTLRRLAQNREAAKKSRLRKKAYVQQLETSRLRLSNLEQDLQRARSQGLFLGCGGGNISPGAAMFDMEYARWLEEDQRHLAEIRAALQAALPDNELRVIVDGYLYHYDELFRLKGVAVKSDVFHLIKGIWASPAERPFIWIGGFKPSELITMLTQQLEPLADQQIEGIMALRQSSHQAEEAFTQGHEQLHHAIVDTIAGGAVIDGVQQMVAAMARISNLEGFVHQADNLRQQTLHQLCRILTVRQAARCFLVIGEYYGRLRALSSLWASRPRENMMIDDNSCQTTTELQMVQPSQSHFSSF 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01437 496 PANTHER TRANSCRIPTION FACTOR TGA9 139 468 - -
Trre7g01437 496 MobiDBLite consensus disorder prediction 182 198 - -
Trre7g01437 496 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 199 214 IPR004827 GO:0003700|GO:0006355
Trre7g01437 496 MobiDBLite consensus disorder prediction 159 198 - -
Trre7g01437 496 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 194 238 IPR004827 GO:0003700|GO:0006355
Trre7g01437 496 CDD bZIP_HBP1b-like 196 247 - -
Trre7g01437 496 MobiDBLite consensus disorder prediction 99 147 - -
Trre7g01437 496 Pfam bZIP transcription factor 196 237 IPR004827 GO:0003700|GO:0006355
Trre7g01437 496 FunFam BZIP family transcription factor 195 244 - -
Trre7g01437 496 Coils Coil 215 242 - -
Trre7g01437 496 Pfam Seed dormancy control 274 349 IPR025422 GO:0006351|GO:0043565
Trre7g01437 496 SUPERFAMILY Leucine zipper domain 196 238 IPR046347 GO:0003700|GO:0006355
Trre7g01437 496 MobiDBLite consensus disorder prediction 159 173 - -
Trre7g01437 496 Gene3D - 195 244 - -
Trre7g01437 496 ProSiteProfiles DOG1 domain profile. 257 465 IPR025422 GO:0006351|GO:0043565
Trre7g01437 496 SMART brlzneu 192 254 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01437 Trre-Chr7 10577080 10584229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01437 143 496 bZIP Transcription Factor Family AT1G08320 64.706 3.38e-165 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre7g01437 DOG1 2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01437 K14431 - gmx:100101904 689.493