Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01432 ATGGAAGAAACCGTGATTGAAAAGCAACGTATGATCGAGATCAAAGCAATGTTGCAAAACATGGAAGCCATTGTGGAAAAGGAACGCAATACCACACCTTTCAACCCTTTACCTCATTTTACTTTGCACAAAGTGTTATCTCAAGAAGCTCCACACTTTTATACTGATCAAGAGTTAGCACAAATAGAAGATATCAATCAAAATTATTTCCAAGTGAATAACAGAAACCGGGGTCACTCGAGTGGTGAAGGAAGTATGTCTTCCGAAGAGAGAAAAGTGAAACCAAAACCCGCCAAGAAGAAAATTGTGCCACCAAAATTGCCTATTCTTGTCGAGAACAAGATCAAGGAGCTGAATGGTCGTGATATTAAATATGTCATGCATAAAGAATTGTTCCCGACAGATCTTGACAAAGAACAAGGTCGTCTTTCACTTCCAGTCGAACTCGATTATCTCAACGAGAGAGAAAAGGCAGCATTAGAAAAAAGAGACAAAAAGGGTAACCTAGTTGGTTTAGAAGTGGTTGTATTGGATCCTTACTTTAGAGATTTTTCGATGTCATTGAGAAAGTGGAACATGCGCAAGCATAGTGTTTACAATCTTGTGAAAAATTGGAAACTTGTTTTGTCGACAAACAAATTTAAAAAGAACCAAAAGCTTAACATTTGGTCATTTAGGGACATCAAAGACAAGTTGCACTTTGTACTCGACGACAAAGTAAATTCCGAAGGAAGTGAAGAGCTCAACAATCCGGATGACAAAAAAGTAAGTTCCAAAGAAAGTGAAGAGCCGAACAATTCAGTTAGTATCCATGAAACAAGTGAAGCAAACAGTTATGCTGTTAATCTGGATATGTAA 858 0.3765 MEETVIEKQRMIEIKAMLQNMEAIVEKERNTTPFNPLPHFTLHKVLSQEAPHFYTDQELAQIEDINQNYFQVNNRNRGHSSGEGSMSSEERKVKPKPAKKKIVPPKLPILVENKIKELNGRDIKYVMHKELFPTDLDKEQGRLSLPVELDYLNEREKAALEKRDKKGNLVGLEVVVLDPYFRDFSMSLRKWNMRKHSVYNLVKNWKLVLSTNKFKKNQKLNIWSFRDIKDKLHFVLDDKVNSEGSEELNNPDDKKVSSKESEEPNNSVSIHETSEANSYAVNLDM 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01432 285 Gene3D - 117 247 IPR015300 -
Trre7g01432 285 MobiDBLite consensus disorder prediction 73 99 - -
Trre7g01432 285 SUPERFAMILY DNA-binding pseudobarrel domain 126 228 IPR015300 -
Trre7g01432 285 MobiDBLite consensus disorder prediction 242 261 - -
Trre7g01432 285 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 55 239 IPR005508 GO:0003677
Trre7g01432 285 MobiDBLite consensus disorder prediction 262 285 - -
Trre7g01432 285 Pfam B3 domain-containing protein At2g31720-like 112 210 IPR005508 GO:0003677
Trre7g01432 285 MobiDBLite consensus disorder prediction 242 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01432 Trre-Chr7 10545539 10546396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01432 115 226 B3 DNA Binding Superfamily AT1G05930 24.786 7.06e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01432 - - tpra:123924633 385.571