Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01421 ATGGCTTATGTTCATGTTATCACAGTTTTTCTCTTTGCAATAGTTTTAGCTAGAATTGACCTATCATCATGCCAAATTGTAAAGGGCAAAGTCTCATGTGTTGATTGCACTCACAACTATGATTTATCTGATATTAAGGTCTCAGTGAAATGTGAAGGTGTTAAAAAACTAGCCATGACAACAACTGAAGAGGATGGTTCCTTCAAGGTTAACCTTCCCTTAGACCAAACAAAAACATCTATGAACTGTTTGGCAAAACTTCTTGGTGGGACAATTCAACTTTATACCAAAAAGCAAAACCAAGTTTCTCAAATTATTAAAGGAAAAGAAGAAAATAGCTACACAATTTCAACTCCTCTTAGTTTCATGATATCATGTCCCAAAAACACAAATTGTAAGGCTGCAAAACCTGTTGGTTCATCCAAAACTATTGATCTTCCTTTGCCTCCAGAATGGGGATTTTCACTCGGGTTTTCTCTTCTTTGTATCCTCTACCTTGCTGCCACTGCATATGAACCAGGGATGTGTGCAAGGCGGCTGACATACTACATGTATCAGCAACAACATAGACCCGAGGATAACAACATCGAGTTTTGGAGGAAGTTTGTCGCTGAATATTTTGCTCCCAATGCGAAGAAGAAATGGTGTGTTTCTATGTATGGAAGTAGCAGTCAAACAACCGGAGTTTTCCCTCAGGATGGATGGCACTGCGAAATATGTAATCACAAACCTGGCCGTGGGTTTGAAGCAACTGTTGAGGTTCTTCCCAGGCTTTTCAAGATAAAGTATGAAAGTGGTACTCTGGAAGAGCTACTTTATGTTGACATGCCCCGTGAATATCATAATTCCTCGGGCCAAATTGTTCTAGACTATGCAAAAGCGATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCATACCTGAAGGTTAGTCTGATTGGAACGGTTGCTCAGAAATACCAGTCTTTAACTCAAAATACAACGCCGAATATATCTGCTCCAGAGTTACAAAACAATTGCAATATCCTGGGATCTTGCAAAGCAGCTTTTGATGAAGCAATTTCGGAGCTTAACACCTTGAATAAGGAGTCCGACAAAGATAGTACGTCGATCATGCAACTTCTGAGGGACAATTTGACTCTTTGGAATTCTGACATCCCAGAAGATGGAGAAAAGTCCCAGAAAGCAAACGACACTGCTAAGCTTGGTGGAGGTGATGATGTAGAGTGA 1263 0.4006 MAYVHVITVFLFAIVLARIDLSSCQIVKGKVSCVDCTHNYDLSDIKVSVKCEGVKKLAMTTTEEDGSFKVNLPLDQTKTSMNCLAKLLGGTIQLYTKKQNQVSQIIKGKEENSYTISTPLSFMISCPKNTNCKAAKPVGSSKTIDLPLPPEWGFSLGFSLLCILYLAATAYEPGMCARRLTYYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSSSQTTGVFPQDGWHCEICNHKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPYLKVSLIGTVAQKYQSLTQNTTPNISAPELQNNCNILGSCKAAFDEAISELNTLNKESDKDSTSIMQLLRDNLTLWNSDIPEDGEKSQKANDTAKLGGGDDVE 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01421 420 MobiDBLite consensus disorder prediction 399 420 - -
Trre7g01421 420 Pfam 14-3-3 protein 357 394 IPR023410 -
Trre7g01421 420 MobiDBLite consensus disorder prediction 396 420 - -
Trre7g01421 420 Pfam LIM-domain binding protein 179 335 IPR029005 -
Trre7g01421 420 Pfam Pollen protein Ole e 1 like 27 88 - -
Trre7g01421 420 PANTHER LIM DOMAIN-BINDING PROTEIN 168 353 IPR029005 -
Trre7g01421 420 SUPERFAMILY 14-3-3 protein 357 402 IPR036815 -
Trre7g01421 420 Gene3D - 346 410 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01421 Trre-Chr7 10459500 10466585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01421 171 365 C2H2 Transcription Factor Family AT1G43850 70.642 2.24e-97 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01421 - - gmx:100799771 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03813 11 51420491 51424846 Trre7g01421 7 10459500 10466585 PCT