Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01419 ATGGAAGATCTCTTCCCTCCTGGTTTTCGTTTCTTCCCTACAGAAGAAGAGCTTGTTAGCTTTTACCTAAACAATAAGCTACAAGGACAATCAAATTCTATAGATAGGGTTATTCCTGTCATTGACATCAATGGTGTAGAACCATGGAATCTCCCAACTTTTGCGGGGGAGCTTTGTCGCGAAGACAAAGAGCAATGGTTTTTCTTTTCGCCGGGGCAAGAGAGAGAAGCAAGGGGAGGGAGACCTAATAGAACAACTGCTTGTGGGTATTGGAAGGCAACTGGTTCTCCTGGCTATGTTTATTCTTCGGATAATAAAGTTATTGGTGTGAAGAAAACTATGGTTTTTTATAAAGGGAAAGCTCCTAGTGGAAAGAAAACTAAATGGAAGATGAATGAATACAGAGCCATTCAAGTTTCTAACCAATCAAACACTGCCACACCTCAGTTGAGACGAGAATTCAGCTTGTGCCGAGTGTATGTGATATCAGGAAGTTTTCGAGCATTTGATAGACGCCCATTAGAAAAGGAAAGAGTTAATCAATTTAAGGTTAATCATCATGATATTAATGAAAATCCATTTGGTGCTAATCAAGCTATAGAAATGGATGCATCAAGTTCATTTGAAATTTCTCATCTTCACAATGCTCAATTGCAAGAGGATGTAGGAGGTTCAAATAGCACTAATTGGGATGTAAATAACAATGACAATGGTAATGATGTTGATTTCCAAGAGCCACTTTGGGAATGGGAGTGTGGAGATTTTAAATTTTAA 774 0.385 MEDLFPPGFRFFPTEEELVSFYLNNKLQGQSNSIDRVIPVIDINGVEPWNLPTFAGELCREDKEQWFFFSPGQEREARGGRPNRTTACGYWKATGSPGYVYSSDNKVIGVKKTMVFYKGKAPSGKKTKWKMNEYRAIQVSNQSNTATPQLRREFSLCRVYVISGSFRAFDRRPLEKERVNQFKVNHHDINENPFGANQAIEMDASSSFEISHLHNAQLQEDVGGSNSTNWDVNNNDNGNDVDFQEPLWEWECGDFKF 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01419 257 Gene3D NAC domain 14 165 IPR036093 GO:0003677|GO:0006355
Trre7g01419 257 SUPERFAMILY NAC domain 5 160 IPR036093 GO:0003677|GO:0006355
Trre7g01419 257 Pfam No apical meristem (NAM) protein 6 135 IPR003441 GO:0003677|GO:0006355
Trre7g01419 257 ProSiteProfiles NAC domain profile. 5 162 IPR003441 GO:0003677|GO:0006355
Trre7g01419 257 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01419 Trre-Chr7 10448845 10450832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01419 1 251 NAC Transcription Factor Family AT5G22380 52.778 1.46e-85 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre7g01419 NAM 1.2e-31 No_clan