Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01403 ATGTCTTCCAACAAGAAAAACCTTATAAGAACATTTTTCACTTCAAATGGAAGTTGTGGATCATGTGCAAAATCAAAAGCAGTTCAAGTACATGAACCAACCCAAAAACCCAAAATTTCCATTAACCAAAAGGTCACAAACCTAAGTAGTAAAGGTTCTTCCACTACAACTTCAGGTGAACGGAACGGCGCCGTTTGTAGCATCGACGACAGCGAAGATTTCTCCACCACTACCTTTTCTGAAGGTGAGACAACAAACAACTACTTTGTACCCAAACAAAGTCCACTAATGAACACCGTGGCGGTCGAGAAGGACTCGGAGGATCCATATCATGATTTCAAACACTCTATGCTTCAAATGATATTTGAGAATGAGATCGATTCGGAGGATGATCTTCAAGATCTTCTCCGATGTTTTCTTCATCTCAATTCTAGTTGTTATCACGGTGTGATTGTTAAAGTCTTCAATGAAATCTGCCACGAAGCTTTTCCCGACAAGGTTTGTAGTATCACTACCAAACCTTCCGGATGA 531 0.403 MSSNKKNLIRTFFTSNGSCGSCAKSKAVQVHEPTQKPKISINQKVTNLSSKGSSTTTSGERNGAVCSIDDSEDFSTTTFSEGETTNNYFVPKQSPLMNTVAVEKDSEDPYHDFKHSMLQMIFENEIDSEDDLQDLLRCFLHLNSSCYHGVIVKVFNEICHEAFPDKVCSITTKPSG 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01403 176 Pfam Transcriptional repressor, ovate 106 161 IPR006458 -
Trre7g01403 176 NCBIfam uncharacterized plant-specific domain TIGR01568 100 160 IPR006458 -
Trre7g01403 176 MobiDBLite consensus disorder prediction 45 66 - -
Trre7g01403 176 ProSiteProfiles OVATE domain profile. 102 161 IPR006458 -
Trre7g01403 176 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 42 162 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01403 Trre-Chr7 10343363 10343893 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre7g01403 Ovate 2.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01403 - - mtr:11445731 288.5