Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01385 ATGGGGTTTTTGTTGAAAGAAGCTTTGAAGACTCTTTGTGCTAGAAATCAGTGGTCTTATGCTGTTTTTTGGAAGATCGGTTGCAATAATTCTAAGCTGTTAATCTGGGAAGATTGTTACTATGAACCCTTACCATCTCATTTCCTTCCACAAATTGTTGGAACGTCTAATATGCCTTACCGAGATGGGGAAGGGTGCTGGTTTTCTTCCGATTCTCAATTAAGGATTCAAGAGGACGACAGAGTCGGTTCATTGATTAACAAAATGATGGTGAATAATTCTGTCAATGTTGCTGGTCAAGGGATACTTGGACGGGCGACATTCACAGGAAATCATCAGTGGATTGTTTTGAACAATTTCGTTAAAGATGCATATCCACCAGAGGTAATAACCGAGCTGCATTGCCAATTTTCAGCTGGAATACAGACAGTGGCGGTTATTCCTGTGCTTCCCCATGGAGTTGTTCAACTTGGTTCTTTCTTGCCGATAATGGAGAATATCGGATTTGTGAATGATGTGAAGAACTTGATCTTTCAATTGGGATGTGTTCCTGGTGCCCTTCTATCTGAAGACTATTCGGCAAGACTTTCCAATGGATCCGTGACTGACTGTGTGCCTGTGTCATTTGATCCACAAATCATTACTCCAAACTTCACTCCGTCAGTAGCTAATGGATCTAACCAACCGAGTAATTCATTGCATGGTCCAATGTTGGTTGCTTCTCAACCACCTCCTTTTCGAAGTCGAGAAATAAATAGTCACCGTGGTACTGTATTAACAACTCAATCCCAAAACCTAAACCAGATATTTGATAGCCCTAGCCAACCAAAGGCTCAACGAGAGAACACAACTGTTAAGGCCGAAGCTGTAGTGATACCTGCAAATCTCGATTCTTCATGTCTGCAACGGCGTTCTGTTTCATATAATGCAAGATCGACATTCAATGAATTAACTGATTCAAACGTATCCAATCTGAATGGTTTCAGCCTTAAACATATGGACCAACAAATCTTATCAGGTATTGGAAGGCAAAGTCATGGTAACCCTAATATGAATCCATCATCAAGTGGCTTAAATATGTCTCGATCGAAAACGGATGGAGGCCAAATTTATTATCAGAATTCTAACAACACTTCATATCTTGGAGGAATCCCAATATGTAGTGGGATGAATAATAATCTTCTAAAGACAAATATGATTAACTGCTCGGTTTCAAGCCCTCCCCATTTTTCCACCGCCGGTTATTCCGGAACACAAAAAGTAGAGTTTGGAATTCAAAACAATAATTCAACTAAAGCTACAAATCACATGCATCTAGAAGGCTTTGATCAGAAGAATCTTCCCAATGATTTAAAGCATGCTCAAGATGCTTTGGCTTCCACGGATCAAAGGATAGATCATTTGCTTGAGGCTCTAAAGATCCCATCATCGTCATCTCTTAACCATGACGAGCACGTGCCTATGAATGATCACATCCCTGATTTTCTTCGTGATTGCCAAGATAAAGATGTTACTGACAACCACATGATGAAAACAAATTTTGAACACGGAGAAGCTTGTACTCAACTTTTGTCAGGTGACGATGACTTGTTTGATGTCTTGGGCTTGGATTTCAAAAGGAAACTGCTGAACGGAAACTGGAATACATTATTTGCCGATGAAACAGATGCCAGTGCAGAAAAACACGACAAAAAGGCAATGTGTAAGAATTTTCCGGTTGTAGGTCATGATAATATATTCCCGGTTAATGAAGCAATATCAGGCAATGGCATCTTCTCTGGAACAAACACTGATCACCTCTTAGATGCTGTGGTTTCGAAGAATCAATCTGCTGCGAATCAGAATTCTGATGAAATGTCTTGCAGGACCACAGTAACAAGGATTAGTACAGCGTCTGTTCTTTCTCCTACCGGAATGCAGATTATGCGCAATCATGTTGGCCAGGTGGCACCGTTTGATTTTCCCAAGACGGAGGTTAAAACGGGTCCTGCAGAAACAAGTTCTCTGATTTCCGGCGGCAGCAAAGATAATGTTGGAAACTGTTCTCAAACCACTTCCATATATGGTTCTCAACTTAGTTCGTGGGTGGAAAATAGTAGCACCAATATGAAGCGCGAAAATAGTGTTTCAACTGGATACTCTAAGCGGCCAGATGAAGTTAGCAAATCAAATCGTAAAAGGCTTAAACCTGGAGAGAACCCTAGGCCTCGTCCAAAAGATCGTCAAATGATTCAAGATCGCGTGAAAGAGTTGCGTGAAATTGTGCCTAATGGAGCAAAGTGTAGCATAGATGCTCTTCTTGAACGAACTATCAAACATATGCTTTTCTTGCAAAGTGTGACGAAGCATGCTGACAAGCTGAAACAGACTGGGGAATCGAAGATTATTAGTAAAGAAGGTGGTTTGTTATTAAAAGACAACTTTGAGGGAGGTGCTACATGGGCATATGAGGTTGGTTCGCAATCTATGGTTTGCCCTATCATAGTTGAAGATCTTAATCATCCTCGTCAGATGCTAGTGGAGATGCTTTGTGAGGAACGAGGTTTTTTTTTGGAAATAGCCGACTTAATCAGGGGATTAGGGTTAACCATCTTGAAGGGTGTCATAGAAGCTCGCAATGACAAGATCTGGGCACGCTTTTCTGTTGAGGCAAATAGGGATGTAACAAGGATGGAAATATTCATGTCACTAGTGCGACTTTTGGAGCAAACAGTGAAGGGAGGCGCATCTTCATCAAATGCTGCAGTTGATAACAACAACAACAACAACACGATGGTTTATCGTTCTATCCCGCAATCCACCTAG 2805 0.4118 MGFLLKEALKTLCARNQWSYAVFWKIGCNNSKLLIWEDCYYEPLPSHFLPQIVGTSNMPYRDGEGCWFSSDSQLRIQEDDRVGSLINKMMVNNSVNVAGQGILGRATFTGNHQWIVLNNFVKDAYPPEVITELHCQFSAGIQTVAVIPVLPHGVVQLGSFLPIMENIGFVNDVKNLIFQLGCVPGALLSEDYSARLSNGSVTDCVPVSFDPQIITPNFTPSVANGSNQPSNSLHGPMLVASQPPPFRSREINSHRGTVLTTQSQNLNQIFDSPSQPKAQRENTTVKAEAVVIPANLDSSCLQRRSVSYNARSTFNELTDSNVSNLNGFSLKHMDQQILSGIGRQSHGNPNMNPSSSGLNMSRSKTDGGQIYYQNSNNTSYLGGIPICSGMNNNLLKTNMINCSVSSPPHFSTAGYSGTQKVEFGIQNNNSTKATNHMHLEGFDQKNLPNDLKHAQDALASTDQRIDHLLEALKIPSSSSLNHDEHVPMNDHIPDFLRDCQDKDVTDNHMMKTNFEHGEACTQLLSGDDDLFDVLGLDFKRKLLNGNWNTLFADETDASAEKHDKKAMCKNFPVVGHDNIFPVNEAISGNGIFSGTNTDHLLDAVVSKNQSAANQNSDEMSCRTTVTRISTASVLSPTGMQIMRNHVGQVAPFDFPKTEVKTGPAETSSLISGGSKDNVGNCSQTTSIYGSQLSSWVENSSTNMKRENSVSTGYSKRPDEVSKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIISKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNHPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVIEARNDKIWARFSVEANRDVTRMEIFMSLVRLLEQTVKGGASSSNAAVDNNNNNNTMVYRSIPQST 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01385 934 Coils Coil 451 471 - -
Trre7g01385 934 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 931 IPR043561 GO:0003700|GO:0006355
Trre7g01385 934 MobiDBLite consensus disorder prediction 658 677 - -
Trre7g01385 934 MobiDBLite consensus disorder prediction 698 743 - -
Trre7g01385 934 MobiDBLite consensus disorder prediction 718 743 - -
Trre7g01385 934 MobiDBLite consensus disorder prediction 661 677 - -
Trre7g01385 934 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 728 777 IPR011598 GO:0046983
Trre7g01385 934 MobiDBLite consensus disorder prediction 698 717 - -
Trre7g01385 934 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 176 IPR025610 -
Trre7g01385 934 CDD bHLH_AtLHW_like 732 801 - -
Trre7g01385 934 MobiDBLite consensus disorder prediction 910 934 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01385 Trre-Chr7 10220526 10225522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01385 526 911 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.788 8.08e-118 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01385 - - aprc:113857443 1261.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03862 11 51808818 51814538 Trre7g01385 7 10220526 10225522 PCT