Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01376 ATGGATGTTGATTCTTCTATGGTGGCGGAAAACGATCAGGATTCAACGGTGCAGAAAAATGAAGAGAGAGAAAAAATAGGTGAAACGACGCCGTCGTCGTTGTCTTCTTCTATCGGTGGATCTCCAGCGGAGCAACAACCACAGCAGCAAGGTGCGGCAGCGGCTGCTCAGGTGCAACATAGTCCGGTTGTTGGTCCGAGGTTAGCGCCATGTTATACTGTGGTGGATGCGATTTTGGAGAAGAAGGAGGATGGACCAGGGCCACGGTGTGGTCATACGTTGACAGCTGTGCCGGCGGTGGGAGAGGAAGGAACGCCGGGATACATTGGACCGAGGCTGATTTTATTCGGCGGTGCTACGGCGCTCGAAGGGAATTCTGCTGCTTCAGGGACTCCTACTTCTGCAGGAAATGCAGGCATACGTTTAGCGGGTGCCACAGCTGACGTCCACTGTTATGATGTCTTGACTAATAAATGGTCTAGGATAACTCCCTTTGGAGAGCCTCCAACTCCAAGGGCTGCACATGTGGCCACTGCTGTGGGAACGATGGTAGTTATTCAGGGTGGCATTGGTCCTGCTGGATTGTCGGCGGAGGACCTTCATGTTCTTGATCTCACACAGCAACGACCGAGATGGCACAGAGTTGGTGTTCCAGGGCCTGGACCAGGGCCACGATATGGACATGTTATGGCTTTGGTGGGGCAGAGGTATCTCATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTAGACACAGCTGCCAAGCCTTACGAATGGCGCAAACTGGAGCCAGAAGGAGAGGGCCCGCCTCCATGCATGTATGCAACTGCAAGTGCACGCTCTGATGGGCTTCTTTTGCTTTGTGGAGGGAGGGATGCCAATAGCGTTCCATTGGCTAGTGCATATGGACTTGCTAAGCATAGAGATGGTCGTTGGGAATGGGCAATTGCCCCCGGAGTTTCACCATCTTCAAGATATCAGCATGCAGCGGTGTTTGTTAATGCAAGGCTCCATGTGTCTGGTGGGGCTCTTGGTGGAGGAAGGATGGTAGAAGATTCATCGAGTGTTGCAGTGTTGGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACTAGTCCAAGAGCGGGCAGATACAGTGCTGATGCAGCTGGTGGAGATGCCTCAGTCGAGTTGGTCCGGCGTTGCAGGCATGCAGCTGCTGCTGTTGGTGATCTAATTTTTATTTATGGCGGTTTACGTGGTGGAATCTTGCTGGATGACCTGCTTGTTGCTGAAGATCTTGCTGCTGCGGAAACAACAAGTGCTGCTTCGCATGCTGCTGCTGCTGCTGCAGCATCTGATGTACAAATGGGACGAGTACCGGGACGATATGGATTTGTTGATGACCGAACAGGGCAAACAATGTCTGATACAACTGCTGATGGTGCAGTTGTTTTGGGAACTCCAGTTGCTGCCCCTGTAAATGGTGACATGTATACTGATATCAGCCCTGAAAATGCCTTGCTTCAGGGGTCTAGGAGAACTAGCAAAGGAGTTGAGTATCTGGTTGAGGCATCTGCTGCAGAAGCTGAAGCTATCAGTGCCACACTGGCTGCTGCCAAGGCACGGCAAGAGAATGGAGATGTTGAATCACCTGATCGGGACCGCGGGGCTGAGGCTACCCCTAGTGGGAAACAAATATCTTCCATGATTAAGCCTGAACCTGGAGGCCCAAATAGTATTGTTTCTGGTGGAGTCAGGCTGCATCACAGAGCTGTGGTTATTGCCGCTGAGACTGGTGGAGCATTAGGTGGCATGGTTAGGCAGCTTTCGATTGATCAGTTTGAAAATGAAGGCAGACGGGTCAGTTATGGGACTCCAGAAAGTGCAACTGCTGCTAGAAAGCTATTAGATCGGCAGATGTCTATCAATAGTGTCCCAAAAAAGGTCATAGCACACCTCTTAAAGCCTCGTGGATGGAAACCACCAGTTCGACGGCAGTTTTTCTTAGATTGCAATGAAATTGCAGATCTTTGTGATAGTGCGGAGAGGATATTTTCTAGCGAACCAACTGTCATAAAGCTTAGGGCACCAATTAAAATATTTGGTGATTTACATGGGCAGTTTGGGGATCTCATGCGCCTCTTTGATGAGTATGGTGCACCATCAACTGCCGGTGACATAGCATATATTGATTATCTATTCCTAGGAGATTATGTTGATAGGGGTCAACACAGTCTTGAAACTATAAGCCTTCTGCTTGCTTTGAAGGTTGAGTATCCAAATAATGTTCATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTTCGAATTGAGTGCATTGAGAGGATGGGTGAAAGAGATGGAATTTGGACGTGGCACCGGATAAACCGCCTGTTTAATTGGCTTCCCCTTGCAGCTCTGATTGAGAAAAAAATTATTTGCATGCATGGGGGTATTGGTCGTTCAATAAATCACTTGGAACAAATTGAGAATATTCAGCGTCCTATTACTATGGAAGCAGGGTCAATTGTGCTGATGGATCTATTGTGGTCTGATCCTACAGAGAATGATAGCGTGGAAGGGCTGCGACCAAATGCTAGAGGTCCAGGGTTAGTTACTTTTGGGCCTGACCGAGTCATGGAATTTTGCAATAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCCCAGGGACATTTAATCACCCTTTTCTCAGCTACAAATTACTGTGGTACTGCAAATAATGCTGGGGCGATATTAGTTTTGGGGAGGGATCTTGTAGTGGTTCCTAAATTAATTCATCCAATACCACCTGCACTTTCTTCACCAGAAACGTCACCAGAAAGACATATTGAAGATACTTGGATGCAGGAGTTGAATGCAAACAGACCACCAACACCAACTAGAGGTCGTCCTCCAGTAGCAAATGACCGTGGTTCATTGGCTTGGATATAG 3012 0.4817 MDVDSSMVAENDQDSTVQKNEEREKIGETTPSSLSSSIGGSPAEQQPQQQGAAAAAQVQHSPVVGPRLAPCYTVVDAILEKKEDGPGPRCGHTLTAVPAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPTSAGNAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRAGRYSADAAGGDASVELVRRCRHAAAAVGDLIFIYGGLRGGILLDDLLVAEDLAAAETTSAASHAAAAAAASDVQMGRVPGRYGFVDDRTGQTMSDTTADGAVVLGTPVAAPVNGDMYTDISPENALLQGSRRTSKGVEYLVEASAAEAEAISATLAAAKARQENGDVESPDRDRGAEATPSGKQISSMIKPEPGGPNSIVSGGVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVIKLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHLEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPIPPALSSPETSPERHIEDTWMQELNANRPPTPTRGRPPVANDRGSLAWI 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01376 1003 SUPERFAMILY Metallo-dependent phosphatases 657 962 IPR029052 -
Trre7g01376 1003 FunFam Serine/threonine-protein phosphatase 636 976 - -
Trre7g01376 1003 MobiDBLite consensus disorder prediction 979 1003 - -
Trre7g01376 1003 Pfam Galactose oxidase, central domain 224 277 - -
Trre7g01376 1003 MobiDBLite consensus disorder prediction 548 562 - -
Trre7g01376 1003 ProSitePatterns Serine/threonine specific protein phosphatases signature. 769 774 IPR006186 GO:0016787
Trre7g01376 1003 CDD MPP_Bsu1_C 652 954 IPR041758 -
Trre7g01376 1003 Pfam Calcineurin-like phosphoesterase 700 907 IPR004843 GO:0016787
Trre7g01376 1003 Pfam Kelch motif 331 376 IPR011498 GO:0005515
Trre7g01376 1003 MobiDBLite consensus disorder prediction 1 58 - -
Trre7g01376 1003 FunFam Serine/threonine-protein phosphatase 269 469 - -
Trre7g01376 1003 SMART pp2a_7 672 956 IPR006186 GO:0016787
Trre7g01376 1003 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1003 - -
Trre7g01376 1003 FunFam Serine/threonine-protein phosphatase 68 265 - -
Trre7g01376 1003 Gene3D - 636 970 IPR029052 -
Trre7g01376 1003 MobiDBLite consensus disorder prediction 545 581 - -
Trre7g01376 1003 Gene3D - 72 197 IPR015915 GO:0005515
Trre7g01376 1003 PIRSF STPPP_BSU1 39 1003 IPR012391 GO:0004721|GO:0009742
Trre7g01376 1003 MobiDBLite consensus disorder prediction 29 56 - -
Trre7g01376 1003 PRINTS Serine/threonine phosphatase family signature 836 863 IPR006186 GO:0016787
Trre7g01376 1003 PRINTS Serine/threonine phosphatase family signature 806 832 IPR006186 GO:0016787
Trre7g01376 1003 PRINTS Serine/threonine phosphatase family signature 896 916 IPR006186 GO:0016787
Trre7g01376 1003 PRINTS Serine/threonine phosphatase family signature 918 934 IPR006186 GO:0016787
Trre7g01376 1003 PRINTS Serine/threonine phosphatase family signature 768 792 IPR006186 GO:0016787
Trre7g01376 1003 PRINTS Serine/threonine phosphatase family signature 735 762 IPR006186 GO:0016787
Trre7g01376 1003 PRINTS Serine/threonine phosphatase family signature 700 727 IPR006186 GO:0016787
Trre7g01376 1003 SUPERFAMILY Kelch motif 144 433 IPR015915 GO:0005515
Trre7g01376 1003 Gene3D - 198 454 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01376 Trre-Chr7 10017777 10031997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01376 664 899 Calmodulin-binding Proteins AT5G63870 29.412 2.49e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01376 - - gmx:100816091 1710.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01376 7 10017777 10031997 Trre7g01376 7 10017777 10031997 ECH
Trre11g03870 11 51933631 51946940 Trre7g01376 7 10017777 10031997 PCT