Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01298 ATGTCTGAGTTTGACACAAACATCCCAACAGCTTTTGATCCCTTTGCTGAGGCAAATGCTGAGGACTCAGGTGCCGGGACAAAAGAATATGTTCATGTCCGTGTACAGCAGCGTAACGGAAGGAAAAGCTTAACAACTGTTCAAGGGTTAAAGAAAGAGTTTAGCTATAGCAAGATACTCAAGGACCTGAAGAAAGAATTCTGCTGTAATGGTACTGTTGTCGAGGACCCTGAGTTGGGCCAGGTCATACAACTTCAGGGAGATCAAAGGAAGAATGTTTCTACTTTCCTTGTGCAGGCGGGCATCGTAAAAAAGGAGAATATCAAGATTCATGGTTTCTAA 342 0.4327 MSEFDTNIPTAFDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVEDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01298 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 113 - -
Trre7g01298 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Trre7g01298 113 NCBIfam translation initiation factor SUI1 7 113 IPR005874 GO:0003743
Trre7g01298 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Trre7g01298 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Trre7g01298 113 FunFam Eukaryotic translation initiation factor SUI1 2 113 - -
Trre7g01298 113 SUPERFAMILY eIF1-like 7 113 IPR036877 GO:0003743|GO:0006413
Trre7g01298 113 Gene3D - 2 113 - -
Trre7g01298 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01298 Trre-Chr7 9334980 9335781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01298 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 89.381 8.06e-76 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01298 K03113 - gmx:100784390 223.787