Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01288 ATGGGAAGCCAAAGTTGCTTTAAGGTTTTGATTATTTGTCTTATAGCAATAGTTGGAGCAACTCAAGCTCAGTTGCAGCTGGGTTTCTATGCTAAAAGCTGCCCAAAAGCTGAACAAATTGTTTTGAAGTATGTTCATGAACATATTCCAAATGCACCATCACTAGCAGCTGCACTCATTAGAGTACATTTTCATGACTGTTTTGTTAGGGGATGTGATGCATCTGTTCTTTTGAACTCAACACAAAACAATCAAGCTGAAAAGAACTCTATTCCAAATCTTTCACTTAGAGGTTTTGATTTCATTGACGCAATAAAGAGTCTTGTTGAAGCTGAATGCCCCAATGTTGTTTCTTGTGCTGATATATTGACTTTGGCCGCTAGAGACTCTATTCATACCATTGGTGGACCTTTTTGGAATGTACCAACTGGTCGAAGGGATGGTGTCATATCTAAAGCATCAGATGTATTTCTTACCCTTCCAGCTCCATTTCACAACCTCACCACTCTCCTAACACTCTTTGGCAATGTTGGACTTGATGCAACTGATTTGGTCTTGCTTTCTGGAGCACACACAATCGGTATTACACATTGCGGACCCGCAACAGTATCAAACCGGTTGTATAATTTTACCGGCAAGGGTGATCAAGATCCAGATCTAGACAGCGCATATGCTAAAAATTTGAAAACCAATAAGTGTAAGAGTATCAATGATCAAACCACAATTCTTGAAATGGACCCCGGAAGTCGCAATACATTTGATCTTGGCTATTACAAGCAACTAGTTAAGAGAAGGGGTTTGTTCCAATCAGATGTTGCATTGCTTAAAAGCTCTACAACAAGATCTATTGTTGCACAACAACTTCAATCAACTAAAAAATTCTTTGTTGAATTTGCTAAGTCTATGGAGAAAATGGGAAGAATTAATGTCAAGATTGGGACTGAAGGAGAGATTAGGAAGCAGTGTGCATTTGTTAATTAA 981 0.3863 MGSQSCFKVLIICLIAIVGATQAQLQLGFYAKSCPKAEQIVLKYVHEHIPNAPSLAAALIRVHFHDCFVRGCDASVLLNSTQNNQAEKNSIPNLSLRGFDFIDAIKSLVEAECPNVVSCADILTLAARDSIHTIGGPFWNVPTGRRDGVISKASDVFLTLPAPFHNLTTLLTLFGNVGLDATDLVLLSGAHTIGITHCGPATVSNRLYNFTGKGDQDPDLDSAYAKNLKTNKCKSINDQTTILEMDPGSRNTFDLGYYKQLVKRRGLFQSDVALLKSSTTRSIVAQQLQSTKKFFVEFAKSMEKMGRINVKIGTEGEIRKQCAFVN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01288 326 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 Gene3D - 28 326 - -
Trre7g01288 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Trre7g01288 326 FunFam Peroxidase 28 167 - -
Trre7g01288 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 PANTHER PEROXIDASE 25-RELATED 15 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 Pfam Peroxidase 45 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 SUPERFAMILY Heme-dependent peroxidases 24 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 FunFam Peroxidase 161 305 - -
Trre7g01288 326 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Trre7g01288 326 Gene3D Peroxidase, domain 2 161 305 - -
Trre7g01288 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g01288 326 CDD secretory_peroxidase 24 325 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01288 Trre-Chr7 9259307 9261214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01288 14 326 Peroxidase AT1G05260 63.376 5.12e-148 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01288 K00430 - gmx:100785662 530.02