Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01287 ATGAAAATGGGAAGCCAAAGTTGCTTTAAGGTTTTGATTATTTGTCTTATAGCAATAGTTGGAGCAACTCAAGCTCAGTTGCAGCTGGGTTTCTATGCTAAAAGCTGCCCAAAAGCTGAACAAATTGTTTTGAAGTATGTTCATGAACATATTCCAAATGCACCATCACTAGCAGCTGCACTCATTAGAGTACATTTTCATGACTGTTTTGTTAGGGGATGTGATGCATCTGTTCTTTTGAACTCAACACAAAACAATCAAGCTGAAAAGAACTCTATTCCAAATCTTTCACTTAGAGGTTTTGATTTCATTGACGCAATAAAGAGTCTTGTTGAAGCTGAATGCCCCAATGTTGTTTCTTGTGCTGATATATTGACTTTGGCCGCTAGAGACTCTATTCATACCATTGGTGGACCTTTTTGGAATGTACCAACTGGTCGAAGGGATGGTGTCATATCTAAAGCATCAGATGTATTTCTTACCCTTCCAGCTCCATTTCACAACCTCACCACTCTCCTAACACTCTTTGGCAATGTTGGACTTGATGCAACTGATTTGGTCTTGCTTTCTGGAGCACACACAATCGGTATTACACATTGCGGACCCGCAACAGTATCAAACCGGTTGTATAATTTTACCGGCAAGGGTGATCAAGATCCAGATCTAGACAGCGCATATGCTAAAAATTTGAAAACCAATAAGTGTAAGAGTATCAATGATCAAACCACAATTCTTGAAATGGACCCCGGAAGTCGCAATACATTTGATCTTGGCTATTACAAGCAACTAGTTAAGAGAAGGGGTTTGTTCCAATCAGATGTTGCATTGCTTAAAAGCTCTACAACAAGATCTATTGTTGCACAACAACTTCAATCAACTAAAAAATTCTTTGTTGAATTTGCTAAGTCTATGGAGAAAATGGGAAGAATTAATGTCAAGATTGGGACTGAAGGAGAGATTAGGAAGCAGTGTGCATTTGTTAATTAA 987 0.385 MKMGSQSCFKVLIICLIAIVGATQAQLQLGFYAKSCPKAEQIVLKYVHEHIPNAPSLAAALIRVHFHDCFVRGCDASVLLNSTQNNQAEKNSIPNLSLRGFDFIDAIKSLVEAECPNVVSCADILTLAARDSIHTIGGPFWNVPTGRRDGVISKASDVFLTLPAPFHNLTTLLTLFGNVGLDATDLVLLSGAHTIGITHCGPATVSNRLYNFTGKGDQDPDLDSAYAKNLKTNKCKSINDQTTILEMDPGSRNTFDLGYYKQLVKRRGLFQSDVALLKSSTTRSIVAQQLQSTKKFFVEFAKSMEKMGRINVKIGTEGEIRKQCAFVN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01287 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Trre7g01287 328 Gene3D - 30 328 - -
Trre7g01287 328 FunFam Peroxidase 163 307 - -
Trre7g01287 328 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01287 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01287 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01287 328 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01287 328 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01287 328 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01287 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01287 328 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01287 328 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01287 328 Gene3D Peroxidase, domain 2 163 307 - -
Trre7g01287 328 SUPERFAMILY Heme-dependent peroxidases 26 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre7g01287 328 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g01287 328 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g01287 328 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g01287 328 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g01287 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g01287 328 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601|GO:0042744
Trre7g01287 328 PANTHER PEROXIDASE 25-RELATED 17 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g01287 328 Pfam Peroxidase 47 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g01287 328 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Trre7g01287 328 FunFam Peroxidase 30 169 - -
Trre7g01287 328 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01287 Trre-Chr7 9259307 9261220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01287 16 328 Peroxidase AT1G05260 63.376 3.94e-148 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01287 K00430 - gmx:100785662 530.02