Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01272 ATGGGTGATGGTGGCGTGGCGTGTATGCCTTTGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAACATGTTATTGAGAAGTTGCCCAATGCCGGGGAGGAAGCTGGTTGCGAAGGGAAGAGTGAGAATGGTTTTAGTTCTGAAGTGGTTAAGCCTCCTGAAAAGAAGAAGGTGAGGAAGGTGATAAAGAAGGTGGTGAAAAAAGTAAAGAAGAAAGTAGTGGCTGGGACAAAGAAGGCTGTAACTGTGAAAGGAGAATTGGTGTTGGATAGAGTGAGCAGCAATGGTGTTGAGAGTGGCGAAATATGTGGCGGGCAGAAAGAAGAAGTGGAAGAGGGTGAATTGGGGACTTTGAAGTGGCCAGGGAGTGAACTGGAGAATGGAGAGCATGTGTCTGAGAAGCCGCCTCCGCCGCCACCACCACGACCGCCACCGCGGAGTAATGAAATTGAAAATGGGGATATTGTCAGTGAGAGGTGGAAAAAAGTGCAGGTGGAGAAGGGAGAGGTTGATAATTGGAGAAAAGAGGAGATATTTTCTGATAAGAGCTGGAAAGGAGAAGGTGAGAAAGGAGCATATGGGTCATGGAGAGGTGGTATAAAGGGTGATGTTGAGAAGGGAGAATTCATTCCAGATAGGTGGCATAGGGGAGACACGGGGAAGGATGATTATGGGTATAGTAGAATCAACAGGTACGAGTCGTATAGGGACAAAGGGTGGAAAACTGAACGTGACGTGGAATGCACACCGTCTTCTGGTAGGTATGCAAGTAATGATTATTTTAGGAAGAAGGACTTTAATAGAAGTGGTAGTCAACATGTGAAAAGTGCACCCAGGTGGGAGAGTGGACAGGAAAGAAATGTAAGGATCAGTTCAAAGATTGTGGATGAGGATAAATATGAAGACAATGGTAGGATACATGCACGGGATTACTCTTCTGGAAGTCGTTTGAAGAGGCATGGCAATGATTCAGATGGTTGGGAGCGAAAGCAGTATGGAGATTATGCTGGTTTCAAAAGTCGAAGGGTATCTGATGATGGCTCACGCCATGTTTATTCAGAGCACCGTGTTTTATCAGAGCACTATTCTCGTCTTTCTGTGGAGAGATCTTACAGAAATGGTTCTTCAAAGTTATCTGTCGACAAATATTCTTCTAGGCATCACGAATCTTTGCCTACCAGATTGGCTTATGATAAACATGGATGCAGTCCTGGTCATTCTGAACGATCCCCACACGATCGAGCTAGATATTATGATAATAAAGATCACGCTCCTGCCCGTCGGTCACCGTATGGCTGTGACAGATCTCTATATAGCCATGAGAAGTCACCACATGGTCGTGACAGATCTCCATATAGCCGTGAGAAGAATTGGGATAGAAGCCGGCACCGTGATCATAAATTAAGAAGTCCTACTCATGCTGAGCGGTCCCCACAAAATCGAGGTCGGCAACGTGGTTGCAGGGATCGGACTCCAAACTTGATAGAGCAATCCCCACTTGATCGAACAAGAGAAAATATTGATCGAGAAACAAGTAATAAACCCTTATCAAGTGAAAAACATAACTCACAATATAGCTGTAAAAATCCCGAAAACAAGAATATTCAAAAGGAGTCAAATCTTTCAGGTATAGAATCTCAAGGTGAAAGAAACGTACATCATGCCAATGGGTCTGTTGAGAAAGGTGTCTGCGATGAACCTGAAAAGGAACAAAAGTCCTGCAGCCCAGCTGTAAACTGCAAAGATTCTCCGTGCTTGCAGCTACCTCCTGAGGAGCAGCCTTTTATGGAAGAGGATATGGAAGAAGATATGGACATCTGTGATACTCCTCCACATGTTCCTGTGGTTGCTGATTCATCAATAGGAAAATGGTTTTATCTTGATTATTATGGCGTAGAACACGGTCCTTCTAAATTGTCTGACATCAAGGTTCTTGTCGATGATGGTGTACTAATGCCAGATCACTTTATTAAGCACATAGATAGTGACAGGTGGTTAACTGTTGAAAATGCGGCATCACCATTGGCAGCTCAAAGTTTTCCATTGATTGTGTCAGACACCATAACCCAGCTTGTAAACCCTCCAGAAGCTCCTGGCAATCTTTTGTCAGACACTGGTGATTTTCTTCAAACTGGACCTGAGAATTATCAGGAAAGGCAATCCCCTTCCCTGCAGTCAAAGTTATGCCCTGATGACAGTGTGCTTGCACCTGAGCTGTTGGAGGACAGCCGCTTTGATGAAAGGGTTGGTGTTCTGTTAGAAGGTTATGATGTCATTCCTGGAAGGGAGCTTGAGGCAATAACAGAAGCTTTGCAAATGAGTTTTGAATATGCAGAGTGGGACGATTTGGGAGACTACAAAGGTTTTCCAGGGCCTGATACTTGCCCGAGCATGGACCATGATTCTAAAATTGATTTTGCATCAAGTCAGCAAGAGTCCCAGTTAATGATGCCCTCTGACAAGGATATTGGCGTTCACCTTGGTGTTCCTGATGACTGGTTTTCTGCTCATTGGTCATGCAAAGGCGGTGACTGGAAGAGGAATGATGACTCCCAAGATAGATATTGTAAAAAGAAACTGGTCCTAAATGATGGGTTTCCATTATGCCAAATGCCTAAGTCTGGATGTGAAGATCCTCGGTGGTCTAGCAAAGATGACTTGTATTATCCATCTTATAGCAGGAAGCTTGACATTCCTCTTTGGGCTTTTTGTACAGATGAGTTGGTTGATTGTGGTGCTGTAAGCAGGGCAATTCAAAGTAAGTTTGGTTCTGTTAGAGGAGTGAAAGGAAATGTTCATTCAGTGGTGAGGATAAATTCATGTGTGGTCAAGGACCAGGGATCATTGGTTTCTGAGTCACACCACAAGACCCAAGGCAAGGATAGACATCGTTCACGGTCAGCCCGACCTTTCTCTTCAATCAGTGATAGCAAGAAATCATCAGCTGAAGAGGATTCCCAGTCAAAAACTGTTAATGATCAAGGTTCTCAAGGCTATTGCAGGAGTGAAGAAATCGTTAATATTTCTCAAGACCATCTCTGTGCTGTCAATGACTTGCAGTTGCATTTGGGTGACTGGTATTATCTTGATGGTTCGGGGCGCGAAAGAGGGCCTTCATCGTTTTCAGATCTACAGTCTTTAGTAGACCAGGGAATTATGAAGAAGTATAGCAGTGTATTCAGGAAATGTGATAAACTCTGGGTTCCTGTTACTTCTTCCACAGAAACTTACGATGTTAATCTCAAGAGCCACCAAGAAAGCAGTTCAGTGTCTGGCGAATTTTCAGGACTTCGATCAGTACAATCTCAAGGTGTTTCATTTGGTGAACCTCATTCAAAGTCAAATATGTTTAACAGCTTATACCCCCAGTTTGTTGGTTATACTCGCGGGAAATTACATGAATTGGTAATTAAATCATACAAGAGCCGGGAGTTTGCTGCAGTAATAAATGAGGTTTTAGATCCTTGGATCAATGCAAGACAGCCAAAAAAGGAAATCGAGAAACAAATATATTGGAAATCAGAAGGTGATGGACATGCTTCCAAAAGGGCTCGAGTGCTGCTTGATGACAGTGAAGAAGAAAGTGATTTTGTAGATGACAGCATTATTATTGAGAACGACAAATCCACTCTTGAGGCTCTGTCTGGTGATGTTACTTTCTCTACAGAAGAAAGTGGCATTAATGTTTCCAAGGAGGGAAGATGGGGCTTATTGGATGGTCCAATGTTGGCACGAGTCTTCCACTTCTTGAGGTCTGATTTGAAGTCCCTCGTCTTTGCGTCCATGACATGCAAGCATTGGAAAGCGTCTGTAAACTTTTACAAAGAAGTCTCGAGAAATATCAACTTGTCATCCCTTGGTCATTCTTGCACGGATTCCATACTTTGGAACATTGTGAATACTTATGAGAAAGACAAGATCAAATATATGATTCTAATGGGTTGCACCAATATTACTGCTGACATGCTAGAGAAAATTCTTCTTTCAGTTTCTGGTTTATCTACAGTAGACATTAGAGGGTGCAATCAGTTTGAGGAGCTGACTTCTAAATTTACCAATTTGAAATGGATCAAGAGCCGAAATTCTCGCATAACTAAAATTGCAGATGAGTCACATAAAATCAGAAGCCTCAAGCAGATTAGTGATCATTCTCTGTCCGGTTCTAAGGCCAGTAGTTTAGATATTAGGGATGATTTTGGTGAGCTGAAGGTTTATTTTGATAGTGTGGACAAGAGAGACACAGCAAAGCAATTATTCCGTCAAAACTTATACAAGCGTTCAAAATTATATGATGCTAGGAAGTCCTCTTCCATTCTCTCTAGAGATGCTCGTACAAGACGATGGTCAATTAAGAAATCTGAAAGTGGTTACAAAAGGATGGAGGAATTTCTTGCTTCAAGACTGAGGGAAATTATGAAGGCAAATGCGTGTGACTTTTTTGTGCCCAAGGTTGCAGAAATTGAGGCTAAAATGAAAAGAGGTTATTACAATGGACATGGGTTGAGCTCTGTGAAGGAGGACATAAGAAGAATGTGCCGTGATGCCATGAAGGCAAAGAACCGTGGTGATGCTAATGATATGAATCATGTTATCTCATTATTTATTCAGCTTGCAACAAGATTGGAGGAGAGTTCTAAATATGTGAATGACAGGGATGCACTTTCGAAGTTATGGGGAAATGACGTACCCTTGGCGTTGTGTTCTAGTTCTTCCAAGTACAAGAAGAATAGATTAGTGACCGACAGAAAGTATAGAAGTGATGACATACATGGTGGTTTGGATAATGGACAGTATGCTTCTGATAGAGAACTCAGAAGGCGTTTATCAAAATTGAATAAGAAATCTATGGACTCAGAGAGTGACACATCTGATGACCTTGATAGGTCTTCTGAAGATGGCAATAGTGATGGGGATAATTCAACCTCCGGTACTGATAGTGACCAAGAAGCTCATTTAGAGAGTCGAACCAGGGAGTCAAAAGGAAATGGATACTTCACACCTAATGATGGGTTGGATTTCATTACTGATGAGCGTGAATGGGGAGCTCGCATGACGAAAGCAAGTCTGGTTCCTCCTGTTACTCGGAAATATGATGTCATTGATCAATATGTCATTGTCGCTGATGAGGATGATGTGAAAAGGAAGATGCGGGTTTCATTACCAGATGACTATGCAGAGAAGTTGACTGCACAAAAGAATGGCACTGAGGAGTCTGATATGGAACTTCCTGAAGTCAAGGGTTACAAACCTAGAAAAATGCTTGAACATGAGGTCGTTGAGCAAGAGGTTTACGGAATTGATCCCTATACACACAATCTTTTACTTGATTCTATGCCAGATGAATTAGATTGGTCTCTACAAGAGAAGCACATGTTTATAGAAGACACACTCCTCCGGACATTGAATATGCAAGTTAGGCATTTTACTGGAACTGGAAGCACTCCAATGAGCTACGCTTTGCAGCCTGTTATCCAAGAGATTGAAAGGAGTGCAGTGGAGCACTGTGACACAAGAATGAGCAGTATGTGTCAAGGTATCCTAAAAGCCATAGACAGACGTCCTGATGACAAATATGTAGCTTATAGGAAGGGACTTGGTGTTGTTTGCAATAAGGAAGAAGGCTTTGGTGAAGATGATTTTGTTGTGGAGTTTCTTGGAGAGGTGTATCCTGTGTGGAAGTGGTTTGAGAAACAAGATGGGATACGATCTCTGCAAAAAAACAGCAAAGATCCAGCACCAGAATTTTATAACATATACCTTGAGAGACCAAAGGGTGATGCTGATGGTTATGACTTAGTTGTTGTTGATGCCATGCATAAGGCTAACTATGCCAGTCGAATATGTCATTCATGCCGACCTAATTGTGAAGCAAAAGTTACTGCTGTAGGTGGTCATTATCAAATTGGTATTTATAGTGTTCGTAAAATTCAGCATGGTGAGGAGATCACTTTTGATTACAATTCTGTTACAGAGAGCAAGGAGGAATATGAAGCATCAGTCTGTTTATGTGGAAGCCAAGTTTGCCGTGGGAGCTATCTAAATCTGACTGGTGAAGGGGCTTTCCAAAAGGTACTGAAGGAATGGCATGGGATTCTTGATTGTCATTATTTGATGCTAGAAGCTTGTGAATTAAACTCCGTTTCTGAAGAGGACTATAATGACCTGGGAAGAGCGGGTTTAGGAAGTTGTTTGCTCGGAGGCTTGCCAGATTGGCTAGTTGCTTATGCGGCTCGCCTTGTGAGATTTATTAATTTTGAAAGAACAAAACTTCCTGAGGCAATTCTAAAGCATAATTTGGAAGAAAAAAGAAAATATTTTTCAGATATATGTCTTGAAGTTGAGAGGAGTGACGCAGAGGTTCAGGCTGAGGGTGTATACAACCAGAGGCTTCAGAATCTTGCAGTCACTCTTGATAAGGTAAGGTATGTTATGAGATGTATATTTGGTGATCCAATGAAAGCTCCACCCCCTCTTGAGAAGCTCAGTCCTGAAGCAGTAGTTTCGTTCCTCTGGAAAGGAGAGGATTCATTTGTTGAGGAGCTTCTTCAGTGCATGACCCCTCATGTGGCAGAATCTACCTTGAATGATCTCAAGTCCAAAGTTCGCGCTCGTGATCCTTTGAGTTCTAAAGATATTCAGAAAGCGGTTCAAAAATCTCTGCTGTGGTTGAGAGATGAGGTTCGAAATATTCCTTGTACATACAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTATGCTTATACCAAGTACTTCTTTAGAGTAGTGGATTATAAATCTATTACTTCACCACCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTGTGCCGACAAATTGGGGGCAGGATTGCAGGAGTATCGAAAGATATACGGTCAAAATTATTGTTTAGGGCAACTGATATTTTGGCATAATCAGAGTGATGGGGAGCCTGATTGTACCCTGGCTAGAGCCAGCAGGGGTAGCTTGTCATTGCCAGACGTCAGTTCCTTTTATGCCAAGGCTCACAAGCCTTCACGGCAACGTGTTTATGGTCCAAAGACTGTAAAATCTATGTTGGCAAGAATGGAGAAGCATCCCCAGAGACCTTGGCCCAAAGACCAGATTTGGTCATTCAAAAGTAGTCCTAAATTTTTTGGTAGCCCAATGTTAGACGCTGTAATTAATAATACTCCACTGGATAGAGATATGGTTCACTGGTTGAAGCACAGACCTGCTATATTCCAGGCCATGTGGGACCAGTGA 7254 0.4245 MGDGGVACMPLQQQQQQQQQQQHVIEKLPNAGEEAGCEGKSENGFSSEVVKPPEKKKVRKVIKKVVKKVKKKVVAGTKKAVTVKGELVLDRVSSNGVESGEICGGQKEEVEEGELGTLKWPGSELENGEHVSEKPPPPPPPRPPPRSNEIENGDIVSERWKKVQVEKGEVDNWRKEEIFSDKSWKGEGEKGAYGSWRGGIKGDVEKGEFIPDRWHRGDTGKDDYGYSRINRYESYRDKGWKTERDVECTPSSGRYASNDYFRKKDFNRSGSQHVKSAPRWESGQERNVRISSKIVDEDKYEDNGRIHARDYSSGSRLKRHGNDSDGWERKQYGDYAGFKSRRVSDDGSRHVYSEHRVLSEHYSRLSVERSYRNGSSKLSVDKYSSRHHESLPTRLAYDKHGCSPGHSERSPHDRARYYDNKDHAPARRSPYGCDRSLYSHEKSPHGRDRSPYSREKNWDRSRHRDHKLRSPTHAERSPQNRGRQRGCRDRTPNLIEQSPLDRTRENIDRETSNKPLSSEKHNSQYSCKNPENKNIQKESNLSGIESQGERNVHHANGSVEKGVCDEPEKEQKSCSPAVNCKDSPCLQLPPEEQPFMEEDMEEDMDICDTPPHVPVVADSSIGKWFYLDYYGVEHGPSKLSDIKVLVDDGVLMPDHFIKHIDSDRWLTVENAASPLAAQSFPLIVSDTITQLVNPPEAPGNLLSDTGDFLQTGPENYQERQSPSLQSKLCPDDSVLAPELLEDSRFDERVGVLLEGYDVIPGRELEAITEALQMSFEYAEWDDLGDYKGFPGPDTCPSMDHDSKIDFASSQQESQLMMPSDKDIGVHLGVPDDWFSAHWSCKGGDWKRNDDSQDRYCKKKLVLNDGFPLCQMPKSGCEDPRWSSKDDLYYPSYSRKLDIPLWAFCTDELVDCGAVSRAIQSKFGSVRGVKGNVHSVVRINSCVVKDQGSLVSESHHKTQGKDRHRSRSARPFSSISDSKKSSAEEDSQSKTVNDQGSQGYCRSEEIVNISQDHLCAVNDLQLHLGDWYYLDGSGRERGPSSFSDLQSLVDQGIMKKYSSVFRKCDKLWVPVTSSTETYDVNLKSHQESSSVSGEFSGLRSVQSQGVSFGEPHSKSNMFNSLYPQFVGYTRGKLHELVIKSYKSREFAAVINEVLDPWINARQPKKEIEKQIYWKSEGDGHASKRARVLLDDSEEESDFVDDSIIIENDKSTLEALSGDVTFSTEESGINVSKEGRWGLLDGPMLARVFHFLRSDLKSLVFASMTCKHWKASVNFYKEVSRNINLSSLGHSCTDSILWNIVNTYEKDKIKYMILMGCTNITADMLEKILLSVSGLSTVDIRGCNQFEELTSKFTNLKWIKSRNSRITKIADESHKIRSLKQISDHSLSGSKASSLDIRDDFGELKVYFDSVDKRDTAKQLFRQNLYKRSKLYDARKSSSILSRDARTRRWSIKKSESGYKRMEEFLASRLREIMKANACDFFVPKVAEIEAKMKRGYYNGHGLSSVKEDIRRMCRDAMKAKNRGDANDMNHVISLFIQLATRLEESSKYVNDRDALSKLWGNDVPLALCSSSSKYKKNRLVTDRKYRSDDIHGGLDNGQYASDRELRRRLSKLNKKSMDSESDTSDDLDRSSEDGNSDGDNSTSGTDSDQEAHLESRTRESKGNGYFTPNDGLDFITDEREWGARMTKASLVPPVTRKYDVIDQYVIVADEDDVKRKMRVSLPDDYAEKLTAQKNGTEESDMELPEVKGYKPRKMLEHEVVEQEVYGIDPYTHNLLLDSMPDELDWSLQEKHMFIEDTLLRTLNMQVRHFTGTGSTPMSYALQPVIQEIERSAVEHCDTRMSSMCQGILKAIDRRPDDKYVAYRKGLGVVCNKEEGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVGGHYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKEWHGILDCHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTKLPEAILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPMKAPPPLEKLSPEAVVSFLWKGEDSFVEELLQCMTPHVAESTLNDLKSKVRARDPLSSKDIQKAVQKSLLWLRDEVRNIPCTYKCRHDAAADLIHIYAYTKYFFRVVDYKSITSPPVYISPLDLGPKCADKLGAGLQEYRKIYGQNYCLGQLIFWHNQSDGEPDCTLARASRGSLSLPDVSSFYAKAHKPSRQRVYGPKTVKSMLARMEKHPQRPWPKDQIWSFKSSPKFFGSPMLDAVINNTPLDRDMVHWLKHRPAIFQAMWDQ 2417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01272 2417 CDD SET_SETD2-like 1861 2009 - -
Trre7g01272 2417 MobiDBLite consensus disorder prediction 697 728 - -
Trre7g01272 2417 MobiDBLite consensus disorder prediction 501 516 - -
Trre7g01272 2417 Pfam SET domain 1932 1987 IPR001214 GO:0005515
Trre7g01272 2417 Gene3D SET domain 1835 2018 IPR046341 -
Trre7g01272 2417 MobiDBLite consensus disorder prediction 1 53 - -
Trre7g01272 2417 MobiDBLite consensus disorder prediction 949 996 - -
Trre7g01272 2417 MobiDBLite consensus disorder prediction 9 26 - -
Trre7g01272 2417 MobiDBLite consensus disorder prediction 517 553 - -
Trre7g01272 2417 MobiDBLite consensus disorder prediction 1610 1670 - -
Trre7g01272 2417 MobiDBLite consensus disorder prediction 381 490 - -
Trre7g01272 2417 MobiDBLite consensus disorder prediction 132 147 - -
Trre7g01272 2417 MobiDBLite consensus disorder prediction 363 576 - -
Trre7g01272 2417 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1998 2417 IPR045606 -
Trre7g01272 2417 SUPERFAMILY SET domain 1862 2010 IPR046341 -
Trre7g01272 2417 MobiDBLite consensus disorder prediction 1610 1634 - -
Trre7g01272 2417 MobiDBLite consensus disorder prediction 554 572 - -
Trre7g01272 2417 ProSiteProfiles SET domain profile. 1844 1987 IPR001214 GO:0005515
Trre7g01272 2417 MobiDBLite consensus disorder prediction 95 158 - -
Trre7g01272 2417 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 164 2417 - -
Trre7g01272 2417 MobiDBLite consensus disorder prediction 704 728 - -
Trre7g01272 2417 MobiDBLite consensus disorder prediction 306 330 - -
Trre7g01272 2417 SMART set_7 1853 1993 IPR001214 GO:0005515
Trre7g01272 2417 MobiDBLite consensus disorder prediction 949 969 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01272 Trre-Chr7 9102376 9119031 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trre7g01272 SET 6.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01272 K22748 - gmx:100781921 3725.25