Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01256 ATGCAGCCAAAAATATCAGATTTTGGTTTGGCAAGAATATTTGGAGGAAAAGAAACCGAGGCAAACACAGAGAGGGTTGTTGGGACATATGGGTACATGTCTCCCGAATATGCATTGGATGGACAATTCTCTACAAAATCAGATGTCTTCAGCTTTGGTGTAGTCTTGCTTGAGATCATAAGTGGGAAAAAGAACACAGGATTCAATCAAACAAAAGAAATTTCAAGTCTTTTGGGTTATGCTTGGACACTATGGCGAGAGGAAAAGTTGCAAGATTTACTCGACCAATCTCTCTGTGATACTTACAACGCTAACCAATTTATTCGGTGTTCACAAATTGGACTCTTATGCGTACAAGATGAACCAGGAGATCGACCAAACATGTCAAATATTGTAACAATGCTAGACAATGAAACTACAGCGCTCCCAACTCCTAATCAGCCAACTTTTTTATGCGAAAAAACCTATCTAACACAGGTTCTTCAAGTCTGCAGCTTGAAAGTAGCATTCACGAAGGCCGATAGACGATAA 531 0.3974 MQPKISDFGLARIFGGKETEANTERVVGTYGYMSPEYALDGQFSTKSDVFSFGVVLLEIISGKKNTGFNQTKEISSLLGYAWTLWREEKLQDLLDQSLCDTYNANQFIRCSQIGLLCVQDEPGDRPNMSNIVTMLDNETTALPTPNQPTFLCEKTYLTQVLQVCSLKVAFTKADRR 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01256 176 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 14 140 - -
Trre7g01256 176 ProSiteProfiles Protein kinase domain profile. 1 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01256 176 SUPERFAMILY Protein kinase-like (PK-like) 2 156 IPR011009 -
Trre7g01256 176 Gene3D Transferase(Phosphotransferase) domain 1 1 147 - -
Trre7g01256 176 Pfam Protein tyrosine and serine/threonine kinase 4 135 IPR001245 GO:0004672|GO:0006468
Trre7g01256 176 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01256 Trre-Chr7 8932988 8933758 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01256 1 151 Receptor kinase-like Gene Family AT4G23150 56.291 1.33e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre7g01256 PK_Tyr_Ser-Thr 4.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01256 - - tpra:123882048 300.441