Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01255 ATGAGAAGTGTTTATCTCTTGTTCAACAACTTATATGCTTCTTGGTTGCTAATATGCTCTTTTCAAGTGTGTTTAGCAGGAGATACTTTGAAGGTAGGCCAGAAGATAATAGATAATCAAAATGATGCCATTCTTGTTTCAGCTGGAAATAAATTTGAACTTGGCTTCTTTACTCCAAGCAACATCCCAGGTGATTCCCAAAGATACTTAGGAATATGGTATTACATAGATGAACGTGACAGGTCAGAAGAATCTCAAAAACAAACAGTTGTGTGGGTTGCAAACAGAGAATACCCTGTACCTGATAGTAATTCAACTACTGGAGTTTTCCAAATAGCAAAAGATGGAAATCTTGTAGTTGTAGACACATCCAGTATTAATATAACATACTGGTCAACCAATTTGTCTTCTAATTCTTCGCCGAAAAACAGGACATTGAAACTCATGGATTCTGGTAATCTTGTGTTACTAGATGATAGGAATTTGAGACTCTGGCAGAGCTTTGAAAATCCATCTGACACATTCCTACCAGGTATGAAGATGGACACCAATTTGATATTAACCAGTTGGAAAAGTGTTGACGACCCAGGAAGTGGGAATTTCACTTTTAAGATGATGAACAACCGTTTCATTATCTTCAACCGAAGCGAAATATTTTGGGAGAGCAAAGAGTACGGAATGTTGAATCCCAATGCAAAGTTTGATCAAGTTGATGATATCAGCTCTGGGGTTTACAATTTGTTGACCAACTCCAATTTCCTCATTAGGAACAAAACAATTCCTATGAAATACGACAATACGAGTTTGTTTCTTGATTCTACAGGTGTGATTCAGTGGCTCGACAATTCTGTTGAAGGTGACGACTTGTCAGTTAGAGTTAGGTGGAAGCAGCCAAAAACCAATTGTTCAAAATATAATCTTTGTGGAGAATTTGCTAGCTGTAATGACAATGATTATAAGAAGTGTAAATGCTTACCTGGATTCGATGACGCGGGAAAAGGAGATTCTTCTCTACAAAACAAGATAGGTTGTATAAGGAGAACATCAATATCGTGCACCCAAAATGATACCTGGGCCTTCTTGAACTTGACCATGATTAAAACACGAAGGCCGGATATAAAGGTTGCGGTAGACCATGAAGTAAATTGCACATCTAAATGCATTGAGAAGTGTCCCCCGTGTCAGGCTTACTCATATGCTCCTCCACCACCCCTTGCTCAGCGTACTCTTAATTCTTTAACATGTTGGATCTGGAATTACAGTTTAACTACTCTTAAAGAAGGCTACACTGCTGGGGATGATGATCGTAGACTCTTTGTCCTAGTCGATAGATCAGACATAGAAGCAACTCCAAGAACTTGTGAGCCTTGTGGTACAAACATAGTCCCTTATCCGCTTAGTACTGGATCCAACTGTGGAGACCTCGCATACTCCAACTTTAGTTGCAACATGAGTCAACTTAGCTTCATCACCAACAACGATAGTTACAGAGTTACTCGTGTATTGCCAAGTTCAAGAACGTTTACCATTTATTATGACGTTAGTTGGGAACCACCTTCCGAACCCGTTTGTGATAACTTCGGTGATTGCCATGGTTGGGAACATTCTACTTGTAGTAAAACAAACAGGTGCCTCTGCAATGCAAACTATGAATGGAATGGAGAGAGTTTAAGTTGTATCGAAACATGCATCATTATTTTCGGTTATGCATGCAGGCGAAGAATAGCTCATATGTTTAAGAAAGATAAGGGAAACATACAAAGAAATGTTAGAGGGAAATTTTACGACAGCGAAAGACATGTGAAGGACTTGATAGACATGGAGGGATTGGAAGAGAATGACAATGAAGGAATCGAGGTTCCTTATTTTGATTTTGAGAGCATACTAATCGCCACAGATGACTTTTCAGATGCAAATAAACTTGGAAAAGGTGGCTTTGGGCCAGTTTACAAGGGTAAACTTGGTGGTCAAGAAATTGCAGTAAAGAGACTTTCAAGTGTTTCGTCACAAGGCTTACAAGAATTCAAGAATGAGGTTGTTTTGATTGCTAAACTTCAGCATCGAAACCTTGTAAAATTACGGGGCTACTGCATAAAAGGGGAAGAAAAAATTTTAATCTATGAGTATTTGCCTAACAAAAGTTTGGACTTATTGATATTTGATCCAACAAAATGCGTAATTTTGGATTGGCAAATGCGGTTTGATATAATTCTCGGAATTGCCTGTGGAATGCTCTATCTTCATCAAGATTCAAGACTTAGAGTTATTCACCACGATTTGAAGACTAGCAACATTCTTCTAGACGAGGAGATGCAACCAAAAATCTCAGATTTTGGACTAGCAAGAATATTTGGTGGTAAAGAAGTAGAGGCAAGCACAGAGAGGATTGTCGGTACATACGGGTACATGTCTCCTGAATATGCGTTGGATGGATATTTCTCAACAAAGTCAGATGTTTTCAGTTTTGGCGTTGTCTTGTTTGAAATCATCAGTGGAAAAAGAAACACTGGATTCTTCCGGTCTAAAGAAATTTCAAGTCTTTTGGGTTATGCTTGGAGACTATGGAGAGAGGAGAAATTACAAGATTTAATGGACCCATCTCTATCAGATTCATACAATGTTAACCAATTTATTAGGTGTGCACAAATTGCACTCCTATGTGTGCAAGATGAACCTGATGATCGACCACACATGTCAAATGTGGTGACCATGCTAGACAATGAAACCACAGCCCTCTTAACCCCTAAACAACCAACTTTTTTTTCACGTAAAGAAATATCTAGTACAGCTTCTTCAAGTCTACAGATTGAGAGTAGCATTCAAGAAAGTCGATAG 2835 0.3862 MRSVYLLFNNLYASWLLICSFQVCLAGDTLKVGQKIIDNQNDAILVSAGNKFELGFFTPSNIPGDSQRYLGIWYYIDERDRSEESQKQTVVWVANREYPVPDSNSTTGVFQIAKDGNLVVVDTSSINITYWSTNLSSNSSPKNRTLKLMDSGNLVLLDDRNLRLWQSFENPSDTFLPGMKMDTNLILTSWKSVDDPGSGNFTFKMMNNRFIIFNRSEIFWESKEYGMLNPNAKFDQVDDISSGVYNLLTNSNFLIRNKTIPMKYDNTSLFLDSTGVIQWLDNSVEGDDLSVRVRWKQPKTNCSKYNLCGEFASCNDNDYKKCKCLPGFDDAGKGDSSLQNKIGCIRRTSISCTQNDTWAFLNLTMIKTRRPDIKVAVDHEVNCTSKCIEKCPPCQAYSYAPPPPLAQRTLNSLTCWIWNYSLTTLKEGYTAGDDDRRLFVLVDRSDIEATPRTCEPCGTNIVPYPLSTGSNCGDLAYSNFSCNMSQLSFITNNDSYRVTRVLPSSRTFTIYYDVSWEPPSEPVCDNFGDCHGWEHSTCSKTNRCLCNANYEWNGESLSCIETCIIIFGYACRRRIAHMFKKDKGNIQRNVRGKFYDSERHVKDLIDMEGLEENDNEGIEVPYFDFESILIATDDFSDANKLGKGGFGPVYKGKLGGQEIAVKRLSSVSSQGLQEFKNEVVLIAKLQHRNLVKLRGYCIKGEEKILIYEYLPNKSLDLLIFDPTKCVILDWQMRFDIILGIACGMLYLHQDSRLRVIHHDLKTSNILLDEEMQPKISDFGLARIFGGKEVEASTERIVGTYGYMSPEYALDGYFSTKSDVFSFGVVLFEIISGKRNTGFFRSKEISSLLGYAWRLWREEKLQDLMDPSLSDSYNVNQFIRCAQIALLCVQDEPDDRPHMSNVVTMLDNETTALLTPKQPTFFSRKEISSTASSSLQIESSIQESR 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01255 944 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 127 927 - -
Trre7g01255 944 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 195 IPR036426 -
Trre7g01255 944 PIRSF SRK 1 470 IPR024171 GO:0004674
Trre7g01255 944 PIRSF SRK 470 944 IPR024171 GO:0004674
Trre7g01255 944 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 600 709 - -
Trre7g01255 944 CDD B_lectin 45 171 IPR001480 -
Trre7g01255 944 SUPERFAMILY Protein kinase-like (PK-like) 617 928 IPR011009 -
Trre7g01255 944 Gene3D Phosphorylase Kinase; domain 1 601 709 - -
Trre7g01255 944 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 710 913 - -
Trre7g01255 944 Gene3D Transferase(Phosphotransferase) domain 1 710 917 - -
Trre7g01255 944 ProSiteProfiles Protein kinase domain profile. 635 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01255 944 ProSiteProfiles PAN/Apple domain profile. 352 443 IPR003609 -
Trre7g01255 944 ProSiteProfiles Bulb-type lectin domain profile. 21 169 IPR001480 -
Trre7g01255 944 CDD STKc_IRAK 641 907 - -
Trre7g01255 944 SMART blect_4 38 171 IPR001480 -
Trre7g01255 944 SMART serkin_6 635 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01255 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 755 767 IPR008271 GO:0004672|GO:0006468
Trre7g01255 944 Pfam Protein tyrosine and serine/threonine kinase 639 905 IPR001245 GO:0004672|GO:0006468
Trre7g01255 944 Gene3D - 22 169 IPR036426 -
Trre7g01255 944 Pfam S-locus glycoprotein domain 263 329 IPR000858 GO:0048544
Trre7g01255 944 Pfam D-mannose binding lectin 89 185 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01255 Trre-Chr7 8927970 8932289 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01255 623 943 Receptor kinase-like Gene Family AT4G11530 55.015 2.02e-119 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre7g01255 PK_Tyr_Ser-Thr 4.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01255 - - tpra:123882048 1325.46