Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01254 ATGAGAAGTGTTTATCTCTTCTTCAACAACCTATATGCTTCTTGGTTGCTAATATGCTCTTTTCAGGTGTGTTTAGCAGGAGATACTTTGAAGGCAGGCCAGAAGATAATAGATAATCAAAATGATGCCATTCTTGTTTCAGCTGGAAAGAAATTTCAACTAGGCTTTTTTACTCCAAGCAACATCCCAGGTGATTCACAAAGATACTTAGGGATATGGTATTATCAAAAACAAGACAGGTCAGAAGAATCTCAAAAACAAACAGTTGTGTGGGTTGCAAACAGAGACTACCCTGTACCTGATAATTCAAGTTCAACTGGGGTTTTCCAAATAGCAAAAGATGGAAATCTTGTAGTTGTAGACACGTCCAGTAACAATATAACATACTGGTCATCCAATTTCTCTTCTAATTCTTCGCCGAAAAACAGGACAGTGAAACTCATGGATTCTGGTAACCTTGTGTTACTAGATGATAGGAATTTGAAACTCTGGCAGAGCTTTGAAAATCCATCTGACACATTCCTACCAGGTATGAAGATGGATACGAGTTTGGTATTGACCAGTTGGAAAAGTGTTGACGATCCAGGAAATGGGAATTTCACTTTTAAGATGGTGAACAACCGTTTCATTATCTTCAACCGAAGCGAAATATTTTGGGAGAGCAAAGAGTTGAATCCCAATGCAAAGTTTGATCAAGTTGATGATATCAGCTATGACGTTTACAATTTGTTTCTTGATTCTATGAAACAAAACAATTTCCTCATTAGGAACAAAACAATTCCTATGAAATACGACAATACGAGTTTGTTTCTTGATTCTATGAAACAAAACAATTTCCTCATTAGGAACAAAACAATTCCTGTGAAAAACTACGACAATACGAGTTTGTTTCTTGATTCTACAGGTGTGATTCAGTGGGTCGACAATTCTGTTGAAGGTGACTCGTCAGTTAGAGTTAGGTGGAAGCAGCCAAAAACCAATTGTTCAAAATATAATGTTTGTGGAGACTTTGCTAGCTGTAATGACGATGATTATAAGAAGTGTAAATGCTTACCTGGATTCGATGACGCGGGAAAAGGAGATTCTTCTCTACAAAACAAGATAGGTTGTATAAGGAGAACATCAATATCGTGTACCCGAAATGATACCTGGGCCTTCTTGAACTTGACCATGATTAAAACACGAAGGCCGGATATAAAGGTTGCGGTAGACCGTGAAGAAAATTGCACATCTATATGTCGTGAGACGTGTCCACCGTGTCAGGCTTACTCATATGCTCCACCCCTTGCTCAGCGTACTCTTAATTCTTTAACATGTTGGATCTGGAATTACAGTTTAACTACTCTTAAAGAAGGCTACACTGCTGGGGATGATGATCGTAGACTCTTTGTCCTAGTCAATAAATCAGATATAGAAGCAACTCCAAGAACTTGTGAGCCTTGTGGTACAAACATAGTCCCTTATCCGCTTAGTACTGGATCCAACTGTGGAGACCTCGCATACTCCAACTTTAGTTGCAACATGAGTCAACTTAGCTTCATCACCAACAACGATAGTTACAGAGTTACTCGTGTATTGCCAAGTTCAAGAACGTTTACCATTTATTATGACGGTAATTTATATAATCAATATTGTGATGAAGGAAATCTGAAATTTTCTTCACCCTATAGCATTACCGGTAACAATTTGTGCTCTGAACATGTGGAAGTTAGTTGGGAACCACCTTCCGAACCCGTTTGTGATAACTTCGGTGATTGCCATGGTTGGGAACATTCTACTTGTAGTAAAACAAACAGGTGCCTCTGCAATGCAAACTATGAATGGAATGGAGAGAGTTTAAGTTGTATCGAAAAACGTAGGTCATTCTATTTGATTCTTGGTTTAACTCTTACTGGTGTGGTTGCTCTAGCATGCATCATTATTTTCGGTTATGCATGCAGGCGAAGAATAGCTCATATGTTTAAGAAAGATAAGGGAAACATACAAAGAAATGTTAGAGGGAAATTTTACGACAGCGAAAGACATGTGAAGGACTTGATAGACATGGAGGGATTGGAAGAGAATGACAATGAAGGAATCGAGGTTCCTTATTTTGATTTTGAGAGCATACTAATCGCCACAGATGACTTTTCAGATGCAAATAAACTTGGAAAAGGTGGCTTTGGGCCAGTTTACAAGGGTAAACTTGGTGGTCAAGAAATTGCAGTAAAGAGACTTTCAAGTGTTTCGTCACAAGGCTTACAAGAATTCAAGAATGAGGTTGTTTTGATTGCTAAACTTCAGCATCGAAACCTTGTAAAATTACGGGGCTACTGCATAAAAGGGGAAGAAAAAATTTTAATCTATGAGTATTTGCCTAACAAAAGTTTGGACTTATTGATATTTGATCCAACAAAATGCGTAATTTTGGATTGGGAAATGCGGTTTGATATAATTCTCGGAATTGCCCGTGGAATGCTCTATCTTCATCAAGATTCAAGACTTAGAGTTATTCACCGCGATTTGAAGACTAGCAACATTCTTCTAGATGAGGAGATGCAACCAAAAATCTCAGATTTTGGACTAGCAAGAATATTTGGTGGTAAAGAAGTAGAGGCAAGCACAGAGAGGATTGTCGGTACATACGGGTACATGTCTCCTGAATATGCGTTGGATGGATATTTCTCAACAAAGTCAGATGTTTTCAGTTTTGGCGTTGTCTTGCTTGAAATCATCAGTGGAAAAAGAAACACTGGATTCTTCCGGTCTAAAGAAATTTCAAGTCTTTTGGGTTATGCTTGGAGACTATGGAGAGAGGAGAAATTACAAGATTTAATGGACCCATCTCTATCAGATTCATACAATGTTAACCAATTTATTAGGTGTGCACAAATTGCACTCCTATGTGTGCAAGATGAACCTGATGATCGTCCACACATGTCAAATGTGGTGACCATGCTAGACAATGAAACCACAACCCTCTTAACCCCTAAACAACCAACCTTTTTTTCACGTAAAGAAATATCTAGTACAGCTTCTTCAAGTCAACAGATTGAGAGTAGCATTCAAGAAGGTCGATAG 3060 0.383 MRSVYLFFNNLYASWLLICSFQVCLAGDTLKAGQKIIDNQNDAILVSAGKKFQLGFFTPSNIPGDSQRYLGIWYYQKQDRSEESQKQTVVWVANRDYPVPDNSSSTGVFQIAKDGNLVVVDTSSNNITYWSSNFSSNSSPKNRTVKLMDSGNLVLLDDRNLKLWQSFENPSDTFLPGMKMDTSLVLTSWKSVDDPGNGNFTFKMVNNRFIIFNRSEIFWESKELNPNAKFDQVDDISYDVYNLFLDSMKQNNFLIRNKTIPMKYDNTSLFLDSMKQNNFLIRNKTIPVKNYDNTSLFLDSTGVIQWVDNSVEGDSSVRVRWKQPKTNCSKYNVCGDFASCNDDDYKKCKCLPGFDDAGKGDSSLQNKIGCIRRTSISCTRNDTWAFLNLTMIKTRRPDIKVAVDREENCTSICRETCPPCQAYSYAPPLAQRTLNSLTCWIWNYSLTTLKEGYTAGDDDRRLFVLVNKSDIEATPRTCEPCGTNIVPYPLSTGSNCGDLAYSNFSCNMSQLSFITNNDSYRVTRVLPSSRTFTIYYDGNLYNQYCDEGNLKFSSPYSITGNNLCSEHVEVSWEPPSEPVCDNFGDCHGWEHSTCSKTNRCLCNANYEWNGESLSCIEKRRSFYLILGLTLTGVVALACIIIFGYACRRRIAHMFKKDKGNIQRNVRGKFYDSERHVKDLIDMEGLEENDNEGIEVPYFDFESILIATDDFSDANKLGKGGFGPVYKGKLGGQEIAVKRLSSVSSQGLQEFKNEVVLIAKLQHRNLVKLRGYCIKGEEKILIYEYLPNKSLDLLIFDPTKCVILDWEMRFDIILGIARGMLYLHQDSRLRVIHRDLKTSNILLDEEMQPKISDFGLARIFGGKEVEASTERIVGTYGYMSPEYALDGYFSTKSDVFSFGVVLLEIISGKRNTGFFRSKEISSLLGYAWRLWREEKLQDLMDPSLSDSYNVNQFIRCAQIALLCVQDEPDDRPHMSNVVTMLDNETTTLLTPKQPTFFSRKEISSTASSSQQIESSIQEGR 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01254 1019 MobiDBLite consensus disorder prediction 998 1019 - -
Trre7g01254 1019 CDD STKc_IRAK 716 982 - -
Trre7g01254 1019 Pfam Protein tyrosine and serine/threonine kinase 714 980 IPR001245 GO:0004672|GO:0006468
Trre7g01254 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Trre7g01254 1019 ProSiteProfiles Protein kinase domain profile. 710 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01254 1019 ProSiteProfiles Bulb-type lectin domain profile. 21 168 IPR001480 -
Trre7g01254 1019 Pfam S-locus glycoprotein domain 288 355 IPR000858 GO:0048544
Trre7g01254 1019 SMART serkin_6 710 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01254 1019 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 785 988 - -
Trre7g01254 1019 Pfam D-mannose binding lectin 88 184 IPR001480 -
Trre7g01254 1019 ProSiteProfiles PAN/Apple domain profile. 378 467 IPR003609 -
Trre7g01254 1019 SUPERFAMILY Protein kinase-like (PK-like) 692 1005 IPR011009 -
Trre7g01254 1019 CDD B_lectin 45 170 IPR001480 -
Trre7g01254 1019 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 194 IPR036426 -
Trre7g01254 1019 Gene3D Phosphorylase Kinase; domain 1 676 784 - -
Trre7g01254 1019 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 131 1003 - -
Trre7g01254 1019 Gene3D Transferase(Phosphotransferase) domain 1 785 993 - -
Trre7g01254 1019 Gene3D - 22 168 IPR036426 -
Trre7g01254 1019 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 675 784 - -
Trre7g01254 1019 SMART blect_4 38 170 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01254 Trre-Chr7 8921427 8925419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01254 698 1018 Receptor kinase-like Gene Family AT4G11530 56.231 1.37e-122 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre7g01254 PK_Tyr_Ser-Thr 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01254 - - tpra:123882048 1398.26