Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01252 ATGAAGAAAAAACCACTCTTCTCACTTTCTCTCTTCATCATCATCTTTTTATCTTTCCAAACATATCCCTCATTTTCTGCTATAACAATCATTTCATCAAACCAATCTCTTTCTGGTGATCAAACACTTGTCTCCAAAGATGGTAAATTTGAATTGGGTTTCTTCAATACTACAGGTAATTCCTCTAACTACTACTACTACATAGGTATGTGGTACAAAAAGATATCTATAAGAACATATGTTTGGGTAGCAAATAGAGATCATCCACTTTCTCATAAAAATTCTTCTAAGTTAACTATATCTAATGGTAATTTAGTTCTTTTAGAACAGTCTCAAAATCTTGTTTGGTCAACAAATTTGAGTTCTAGTTCTAGATCAAGTTCTGTTGTAGCTGTTCTTTTAGATTCTGGTAATCTTATATTAAGTAATACGCCTAATGCGTCGGAATCAGAAGCTCTTTGGCAGAGTTTTGATTTTCCGACGAATACATGGCTTCCTGGTGGTAAGATTAAGCTTGATAAGATAACAAAGAAGCCTCAATATCTTACTGCATGGAAAAACAGTAATGATCCAGCAACAGGTTTATTTTCTCTTGAATTAGACCCTAATGGAACCGATTCGTATTTGATTCTTTGGAATAAAACTAAACAGTATTGGACAAGTGGTCCTTGGAATGGACAAATCTTTAGTTTGGTTCCTGAAATGAGGTCAAACTATATCTACAATTTTACCTATATGTCGAATGCGACTGAGAGTTACTTCACGTATTCTGTTTACGATAGTTCTTTTATATCTCGTTTCGTGATGGATGTCTCGGGACAAATCAAGCAATTTACTTGGCTTGAGAGTACTCAGCAATGGAATTTGTTTTGGTCACAGCCAAGAGGACAGTGTGAGGTTTATGCTTTCTGTGGTGCATTTGGTAGCTGTAATGAGAATTCAAAGCCTTATTGTAATTGTTTGAATGGTTACGAACCGAAATCGCAATCTGATTGGGATCTTGGTGATTACTCACATGGTTGTGTCAAAAGAAACAAGTTTCAATGTGAGGTATCTTCTAATCCTTCTAGTGGTGCTAAGGATAGATTCTTAACCAAATCCAATGTGGCTTTGCCTGAAGATGCAAAACAAGTTGTGGAAGCTGGTACTGTGGATGAATGTGAGTCAACCTGTTTGAGTAACTGTTCTTGCAATGCATATGCTTATAACAGTAGCGGATGTTTCGTTTGGCGAGGAGAACTCTTGAATCTGCAACAGCTTTCTCAGGATGATAGTAATGGACAGACTTTGTTTCTAAAACTCGCAGCATCGGAGTTTTCTGATTCTAAAAGCAATAAAGGGACAACAATTGGTATTGCTGTTGGGGCTTTTTGTGGTATAGTGGTTGCTCTTGTTCTTGTTCTAGTTTTTGTGATTAGGCGAAGAAAGAGGCTATCTGGAGCAAGAACTACTGTGGAGGGTTCATTGATAGCATTTGCATATAGAGATTTACAAACTGCTACGAAGAATTTCTCGGACAAACTTGGAGGAGGAGGTTTTGGTTCTGTCTTCAAAGGAACATTACCTGATTCAAGCGTTGTAGCAGTGAAGAAACTCGAAAGCATTAGCCAAGGCGAGAAGCAGTTTCGAACAGAAGTGAGTACTATCGGGACTGTCCAACATGTCAACCTTGTTAGGCTTCGTGGTTTCTGTTCCGAAGGCGACAAAAGGCTTCTGGTTTATGATTACATGCCAAACGGGTCTTTGGATTCAAGCCTATTTCAAGAAAAGGTGTTGGATTGGAAAGTAAGATACCAAATTGCGCTCGGAATAGCAAGAGGATTGACATATCTTCATGAAAAATGTAGAGACTGTATCATTCACTGTGACGTGAAGCCGGAAAACATTCTCATAGATTCTGATTTTTGTCCAAAGGTAGCCGACTTCGGCCTGGCAAAGCTTGTCGGAAGGGACTTCAGCAGGGTCCTCACTACGATGAGAGGAACAAGAGGTTATCTAGCTCCAGAATGGATTTCAGGAGTAGCTATAACCGCTAAAGCCGATGTATACAGCTATGGAATGATGCTTTTTGAGCTCGTTTCAGGTAGACGGAACTCCGATCCTTCTGCAGATGGTCAAGTTAAATTCTTTCCTACATTGGCTGCAAACCTAGTACACCAAGGAGGGAATGTGATTAGCCTATTGGACTCGAGATTGGAAGGAGATGCCGATGTTGAAGAGATTGCTCGAGTCATAAAAATCGCTTCATGGTGTGTTCAAGATGATGAAGCTCATAGGCCATCCATGGGTCAAGTAGTTCAAATACTTGAAGGGGTTTTGGAAGTGGCATTGCCTCCAATTCCTAGAGCACTTCAAGCTTTTATTGATGATCATGAGGACATAGTTTTCTTCACTGATTCAAGCTCAACTCATAACTCACAGGTAAAAAGCAATGTTTCTACAGCTTCATCTCAAGCCAAACGCAACATCTCATCTGCGCTAGCTAGCACATAG 2493 0.3939 MKKKPLFSLSLFIIIFLSFQTYPSFSAITIISSNQSLSGDQTLVSKDGKFELGFFNTTGNSSNYYYYIGMWYKKISIRTYVWVANRDHPLSHKNSSKLTISNGNLVLLEQSQNLVWSTNLSSSSRSSSVVAVLLDSGNLILSNTPNASESEALWQSFDFPTNTWLPGGKIKLDKITKKPQYLTAWKNSNDPATGLFSLELDPNGTDSYLILWNKTKQYWTSGPWNGQIFSLVPEMRSNYIYNFTYMSNATESYFTYSVYDSSFISRFVMDVSGQIKQFTWLESTQQWNLFWSQPRGQCEVYAFCGAFGSCNENSKPYCNCLNGYEPKSQSDWDLGDYSHGCVKRNKFQCEVSSNPSSGAKDRFLTKSNVALPEDAKQVVEAGTVDECESTCLSNCSCNAYAYNSSGCFVWRGELLNLQQLSQDDSNGQTLFLKLAASEFSDSKSNKGTTIGIAVGAFCGIVVALVLVLVFVIRRRKRLSGARTTVEGSLIAFAYRDLQTATKNFSDKLGGGGFGSVFKGTLPDSSVVAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGDKRLLVYDYMPNGSLDSSLFQEKVLDWKVRYQIALGIARGLTYLHEKCRDCIIHCDVKPENILIDSDFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFELVSGRRNSDPSADGQVKFFPTLAANLVHQGGNVISLLDSRLEGDADVEEIARVIKIASWCVQDDEAHRPSMGQVVQILEGVLEVALPPIPRALQAFIDDHEDIVFFTDSSSTHNSQVKSNVSTASSQAKRNISSALAST 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01252 830 Pfam S-locus glycoprotein domain 219 328 IPR000858 GO:0048544
Trre7g01252 830 PIRSF SRK 1 821 IPR024171 GO:0004674
Trre7g01252 830 SUPERFAMILY Protein kinase-like (PK-like) 486 770 IPR011009 -
Trre7g01252 830 CDD STKc_IRAK 508 771 - -
Trre7g01252 830 Pfam PAN-like domain 359 416 IPR003609 -
Trre7g01252 830 ProSiteProfiles PAN/Apple domain profile. 349 435 IPR003609 -
Trre7g01252 830 SMART blect_4 34 160 IPR001480 -
Trre7g01252 830 FunFam Serine/threonine-protein kinase 469 576 - -
Trre7g01252 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 225 IPR036426 -
Trre7g01252 830 ProSiteProfiles Protein kinase domain profile. 502 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01252 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Trre7g01252 830 ProSitePatterns Protein kinases ATP-binding region signature. 508 531 IPR017441 GO:0005524
Trre7g01252 830 CDD PAN_AP_plant 356 435 - -
Trre7g01252 830 Gene3D - 26 157 IPR036426 -
Trre7g01252 830 SMART ntp_6 358 434 IPR003609 -
Trre7g01252 830 ProSiteProfiles Bulb-type lectin domain profile. 28 154 IPR001480 -
Trre7g01252 830 Gene3D Hepatocyte Growth Factor 356 435 - -
Trre7g01252 830 FunFam Serine/threonine-protein kinase 577 777 - -
Trre7g01252 830 Pfam D-mannose binding lectin 79 186 IPR001480 -
Trre7g01252 830 Gene3D Transferase(Phosphotransferase) domain 1 577 776 - -
Trre7g01252 830 Pfam Protein kinase domain 505 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01252 830 SMART serkin_6 502 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01252 830 CDD B_lectin 34 160 IPR001480 -
Trre7g01252 830 FunFam Serine/threonine-protein kinase 24 157 - -
Trre7g01252 830 PANTHER OS07G0415500 PROTEIN 9 781 - -
Trre7g01252 830 Gene3D Phosphorylase Kinase; domain 1 469 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01252 Trre-Chr7 8905924 8908416 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01252 440 775 Receptor kinase-like Gene Family AT1G56120 45.930 3.25e-80 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Trre7g01252 Pkinase 2.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01252 - - gmx:100305421 1261.51