Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01225 ATGAGTTGGTCTTCCTTTTATAAGACAGCCTCAAGGGTTTTTCATGAGTATCCATCTTGGTCCAAGACTCTTGTTGTATGCACATTCATTAGTGGTGGAGGTATAGTTGCATATGGTGATGGCAGAGCAGCATATAGTGATTGTGGTGATCAAAGCCCAAAAAAGAAAGTGGTGGTGCTTGGAACTGGTTGGGCTGGAACCAGTTTTGTGAAGAACATGAAAAGCTCTTCTTATGATATTCATGTGGTTTCACCTCGTAATTATTTTGCATTCACTCCTTTGCTACCAAGTGTCACTTGTGGCACAGTCGAGGCACGTAGCGTTATTGAACCAATTCGAAATATCAGCAGAAAGAGTGGTTTAGATATTGAATTCAGTGAAGCTGAATGCTATAAGATTGATCCAAAGAACAACAAAGTTTACTGCAGAGCTTCTAATCAAGACAAAAAGCTTGGTGGAATAGAAGAATTTTCCATTGATTATGATTACTTATGCAGTTTTATTAGGTAG 510 0.3882 MSWSSFYKTASRVFHEYPSWSKTLVVCTFISGGGIVAYGDGRAAYSDCGDQSPKKKVVVLGTGWAGTSFVKNMKSSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSVIEPIRNISRKSGLDIEFSEAECYKIDPKNNKVYCRASNQDKKLGGIEEFSIDYDYLCSFIR 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01225 169 PANTHER NADH DEHYDROGENASE 50 164 IPR045024 GO:0003954|GO:0006116
Trre7g01225 169 Gene3D - 48 166 - -
Trre7g01225 169 SUPERFAMILY FAD/NAD(P)-binding domain 55 164 IPR036188 -
Trre7g01225 169 Pfam Pyridine nucleotide-disulphide oxidoreductase 55 164 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01225 Trre-Chr7 8668500 8669854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01225 5 165 Chloroplast and Mitochondria Gene Families AT4G21490 58.896 5.97e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01225 K03885 - gmx:100820044 268.47