Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01224 ATGGAATGTTTAGATTCTTGCCACGGCGGAGGTGTGGTGGCACTCTCAGAGTCACAATCAGAAGCTCAACATCCTAATATTGAAGATCATCAGCCCCGAAAAAAGAAAGTTGTGGTCCTTGGAACTGGATGGGCTGCTACCAGTTTCCTTAAGGGTTTGGATGCTTCAATGTATGATGTTCAAGTTGTTTCTCCTCTAGGAGCACAAGTAAATACTTTCAATACACCTGGTGTCAAGGAGAACTGTCATTTTCTTAAGAATGTCGAGGACGCTCAAAAGATCAGACTGTCTGTGATAAATTGTCTTGAGAAGGCTGTTCTTCCTAGTCAATCTGAAGAGGAGCAAAGGTCAAATCTTCATTTTGTAATCGTTGGAGGAGGACCAACTGGTGTCGAATTTGCTGCAGAGCTGCATGATTATATCCAAGAAGATTTGATCAACTTATACCCAACCGTTAAAGATAAAGTGAAGATAACGTTAATTCAATCTGGAGATCACATCTTGAATATGTTCGATGAAAGAATAAGTACGTTTGCTGAGCAGAAGTTTAGGAGAGATGGTATAGAAGTTCAAACTGGATGCCGGGTTTTGAGTGTTGATGACAAGGAGATTACAATGAAGGCGAAATCAACAGGAGTGGTTTCCTCTTTGCCACATGGATTGATTATCTGGTCCACCGGAATTTCTACTCTTCCAGTTATACGGGAATTTATGGAAGAAATTGGTCAGACTAAAAGGCATGTACTTGCAACTGATGAATGGTTGAGAGTACAGGGATGTAAAGATGTGTTTGCAATTGGTGATTGTTCATCAATAAATCAACGTAAAATCATGGATGATATCTTGGACATATTTAAGGCTGCAGACAAAAATAACTCTGGTACCTTAACTGTAGAAGAATTCGAAGAAGTGATGGATGATATAATCTTAAGATATCCTCAAGTTGAATACTATCTACAGAAGAACCATATACTTGATTTGAGGGTTCTCTGGAACGACCCAGAAGGGAATGAAAGAAAAGAAATAGACATAGAAGGGTTTAAAAGGGCCCTTTCTTTTGCAGATTCACAGGTGAAGACCCTTCCAGCAACTGCACAGGTTGCAGCTCAACAAGGTGCATATCTAGCTAGTTGCTTTAATCACGTTGATCTTTGTTTAGACCATCCAGAAGGACCTCGACGATTTTCAGGATCCGGACATCATATGTTTCGTCCCTTCCGGTATAAACATTTTGGGCAATTTGCTCCACTGGGTGGGGAGCAGGCAGCAGCAGAACTTCCTGGAGACTGGGTTTCCATTGGTCACAGCACTCAATGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGCACACAGTATTTGGTCGTCTCTGATTGGACTAGAAAATTCATATTTGGAAGGGATTCAAGTCGAGTTTGA 1428 0.4118 MECLDSCHGGGVVALSESQSEAQHPNIEDHQPRKKKVVVLGTGWAATSFLKGLDASMYDVQVVSPLGAQVNTFNTPGVKENCHFLKNVEDAQKIRLSVINCLEKAVLPSQSEEEQRSNLHFVIVGGGPTGVEFAAELHDYIQEDLINLYPTVKDKVKITLIQSGDHILNMFDERISTFAEQKFRRDGIEVQTGCRVLSVDDKEITMKAKSTGVVSSLPHGLIIWSTGISTLPVIREFMEEIGQTKRHVLATDEWLRVQGCKDVFAIGDCSSINQRKIMDDILDIFKAADKNNSGTLTVEEFEEVMDDIILRYPQVEYYLQKNHILDLRVLWNDPEGNERKEIDIEGFKRALSFADSQVKTLPATAQVAAQQGAYLASCFNHVDLCLDHPEGPRRFSGSGHHMFRPFRYKHFGQFAPLGGEQAAAELPGDWVSIGHSTQWLWYSVYASKQVSWRTQYLVVSDWTRKFIFGRDSSRV 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01224 475 Gene3D - 24 66 - -
Trre7g01224 475 Gene3D - 334 475 - -
Trre7g01224 475 Gene3D - 67 299 - -
Trre7g01224 475 ProSiteProfiles EF-hand calcium-binding domain profile. 276 311 IPR002048 GO:0005509
Trre7g01224 475 Pfam Pyridine nucleotide-disulphide oxidoreductase 66 275 IPR023753 GO:0016491
Trre7g01224 475 SMART efh_1 280 308 IPR002048 GO:0005509
Trre7g01224 475 SUPERFAMILY FAD/NAD(P)-binding domain 119 273 IPR036188 -
Trre7g01224 475 ProSitePatterns EF-hand calcium-binding domain. 289 301 IPR018247 -
Trre7g01224 475 SUPERFAMILY FAD/NAD(P)-binding domain 36 172 IPR036188 -
Trre7g01224 475 PANTHER NADH DEHYDROGENASE 66 475 IPR045024 GO:0003954|GO:0006116
Trre7g01224 475 SUPERFAMILY EF-hand 234 359 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01224 Trre-Chr7 8661938 8667104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01224 4 65 Chloroplast and Mitochondria Gene Families AT4G21490 46.774 2.00e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01224 K03885 - gmx:100793566 707.983