Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01216 ATGAAGATCTATGGACATGTTATTCTATTGGGATTTTTGTTTATTTCTATAATTCAGATTTCAACTGCTGTTACTGATCCTACTGATGTTGCTGCGCTTAATAGCTTATATGCTTCATTGGGATCTCCTCTTCTACCTGGGTGGGTTTCTAGTGGTGGAGATCCGTGCGGAGAAGGATGGCAAGGCATTCAATGTAATGGTTCGTTTATACAGAAAATTGTTCTAAACGGTGCAAATTTGGGAGGAGAGCTGGGCGATAAACTTGCAACATTTGTTTCAATCTCAGTAATCGATCTGAGCAACAACAACATTGGAGGAAGTATTCCATCCAATTTGCCAGCTACGATGAGAAACTTTTTTCTTTCAGCCAACCTGTTTACTGGAAGTATTCCAGCCTCTTTATCCGCTTTAACCGGACTGAGTGACATGTCTCTTAACAACAATCATTTAACCGGAGAAATACCAGATGCATTTTTGTCACTTACACAGTTGATCAATCTAGATTTATCGAGTAATAACTTGAGCGGGGAACTACCTCCTTCGATGGAGAACTTGTCATCTTTGACCACCTTGCGCTTGCAGGATAATCAACTATCTGGGACACTTGATGTTTTACAAGACCTTCCTCTGAAAGATTTGAATGTCGAAAATAACCAATTTACTGGCCCGATACCTCCAAAGTTGCTAAGCATCCCTAAATTCAGACAAGCTGGAAATCCATTTAATGATAATAATTCCACGTCAACTCGTGCTCCCGCACCTCGCTCCCCAGTGACAGCACCGCCAGGAGCACCACCAGGAGCACCGTTTTTTGTAGTACCATCTTCTGGTTCTGGCCCTGTACCTACCAAACAGGCTGATGGACCGACTGTAGCGACTGAGTCAAAGTCTGGGAAATCAAACAAACATACCAAAAAGGTGGTTTTGATATCTATTGGCAGTATTTTGGCATTCATTATTTTGGTACTAGCACTCGTTCTATTTATTCCAAGATGTGGTCGAAGAAGGGAACGGGTTGACCGAAGGTCCAGGCGACATCAAATTGGTGCATATGGAGATGAAAGACAACAAAATCCTAGGGATTTAGGGGCTATAGTTCAACCACCAATTCAACCAGAAAAAGTATCGATACCGACACGGGATGTCTTGAGGCCACATACTGATCGCCAAGAAGAGCCTAGGAGAGTGTGGGCTGTTCCAAATGTACAGGATAAGCCAGAGAAGGATGCGCAAAGAATGATGACAATACCAAAGCCGGTTCATCATGAGATTGATATCAGTACACCAGAAGTGTATTCTGTGCCTCCTCCTCCGCCTCCACCACCACCTCCTCCTCCGCCACCCCCACCTCCACCTCCTCCTGTTCTTCCTACTAAGAGGATGATTGTTGAGCCAACAATTCCTCATAGAGGAACTAGTGCCGGTCCATCCTCAAAAAGTTCTATTCCACCTCCTCCTACTTTTGCAAAATCTTTCACCATCGCATCCCTTCAACAGTACACAAATAGCTTTTCTCAAGAAAATCTTATAGGAGGAGGCATGTTGGGCACTGTTTACAGGGCAGAGCTACCTGGTGGGAAGCTACTTGCTGTAAAGAAACTTGACAGAAGAGCTTCTGTTCACCAGAAGGATGAAGAGTTTCTTGAATTGGTAAATAGTATCGACAGAATACGACATACAAATATTGTTGAGCTCATTGGATACTGTTCAGAGCATGGTCAAAGGCTTCTGATCTATGAGTACTGCAGTAATGGGTCACTACATGATGCACTTCACACAGATGAAGAATTCAAAGCAAAATTATCATGGAATGCTCGCATTCGGATGGCACTTGGGACAGCTAGAGCCTTAGAGTATTTGCATGAGCAATGTCAGCCGCCTGTGGTACACAGAAATTTAAAGTCTGCCAATATTCTCCTTGATGATGATCTATCTGTGCGTGTATCTGATTGTGGTTTAGCTCCATTGATAGCTTCAGGGTCTGTAATTCAGCTCTCGGGGAACCTGCTATCAGCTTATGGTTATGGAGCTCCAGAATTTGAATCGGGAACTTACACTTACCAAAGCGATGTATACAGTGTTGGAGTAGTTATGCTAGAACTTTTGACCGGCCGTCAATCCCATGACAGGACACGTCCACGAGGAGAGCAATTTCTTGCTAGATGGGCAATTCCCAAACTTCACGATATTGATGCGTTATCAAAGATGGTCGATCCTTCTTTAAATGGAGTTTACCCTGCAAAGTCATTGTCCAATTTTGCCGACATTATTGCTCAATGCCTTCAGCCGGGGCCCGAATTTAGGCCAGCAATGTCAGAGGTGGTCTTATACTTACTAAATATGATAAAGAGGGAGTCTCAAAAAAGTGATTCAAATGAAAAATGA 2385 0.4331 MKIYGHVILLGFLFISIIQISTAVTDPTDVAALNSLYASLGSPLLPGWVSSGGDPCGEGWQGIQCNGSFIQKIVLNGANLGGELGDKLATFVSISVIDLSNNNIGGSIPSNLPATMRNFFLSANLFTGSIPASLSALTGLSDMSLNNNHLTGEIPDAFLSLTQLINLDLSSNNLSGELPPSMENLSSLTTLRLQDNQLSGTLDVLQDLPLKDLNVENNQFTGPIPPKLLSIPKFRQAGNPFNDNNSTSTRAPAPRSPVTAPPGAPPGAPFFVVPSSGSGPVPTKQADGPTVATESKSGKSNKHTKKVVLISIGSILAFIILVLALVLFIPRCGRRRERVDRRSRRHQIGAYGDERQQNPRDLGAIVQPPIQPEKVSIPTRDVLRPHTDRQEEPRRVWAVPNVQDKPEKDAQRMMTIPKPVHHEIDISTPEVYSVPPPPPPPPPPPPPPPPPPPPVLPTKRMIVEPTIPHRGTSAGPSSKSSIPPPPTFAKSFTIASLQQYTNSFSQENLIGGGMLGTVYRAELPGGKLLAVKKLDRRASVHQKDEEFLELVNSIDRIRHTNIVELIGYCSEHGQRLLIYEYCSNGSLHDALHTDEEFKAKLSWNARIRMALGTARALEYLHEQCQPPVVHRNLKSANILLDDDLSVRVSDCGLAPLIASGSVIQLSGNLLSAYGYGAPEFESGTYTYQSDVYSVGVVMLELLTGRQSHDRTRPRGEQFLARWAIPKLHDIDALSKMVDPSLNGVYPAKSLSNFADIIAQCLQPGPEFRPAMSEVVLYLLNMIKRESQKSDSNEK 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01216 794 MobiDBLite consensus disorder prediction 471 487 - -
Trre7g01216 794 MobiDBLite consensus disorder prediction 278 297 - -
Trre7g01216 794 Gene3D Transferase(Phosphotransferase) domain 1 582 794 - -
Trre7g01216 794 SUPERFAMILY L domain-like 25 232 - -
Trre7g01216 794 ProSiteProfiles Protein kinase domain profile. 504 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01216 794 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 471 581 - -
Trre7g01216 794 SUPERFAMILY Formin homology 2 domain (FH2 domain) 444 454 - -
Trre7g01216 794 Pfam Leucine rich repeat 139 198 IPR001611 GO:0005515
Trre7g01216 794 Pfam Protein tyrosine and serine/threonine kinase 507 776 IPR001245 GO:0004672|GO:0006468
Trre7g01216 794 Gene3D Phosphorylase Kinase; domain 1 477 581 - -
Trre7g01216 794 SUPERFAMILY Protein kinase-like (PK-like) 477 778 IPR011009 -
Trre7g01216 794 MobiDBLite consensus disorder prediction 235 302 - -
Trre7g01216 794 MobiDBLite consensus disorder prediction 431 459 - -
Trre7g01216 794 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Trre7g01216 794 MobiDBLite consensus disorder prediction 429 487 - -
Trre7g01216 794 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 66 775 - -
Trre7g01216 794 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 582 792 - -
Trre7g01216 794 MobiDBLite consensus disorder prediction 237 254 - -
Trre7g01216 794 Gene3D Ribonuclease Inhibitor 25 251 IPR032675 -
Trre7g01216 794 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 26 253 - -
Trre7g01216 794 MobiDBLite consensus disorder prediction 255 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01216 Trre-Chr7 8603262 8608603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01216 15 789 Strubbelig Receptor Gene Family AT4G03390 59.820 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Trre7g01216 PK_Tyr_Ser-Thr 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01216 - - mtr:25492087 1231.08