Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01215 ATGGATTGGAAGAGATCTATTATGAAGATCTATGGACATGTTATTCTATTGGGATTTTTGTTTATTTCTATAATTCAGATTTCAACTGCTGTTACTGATCCTACTGATGTTGCTGCGCTTAATAGCTTATATGCTTCATTGGGATCTCCTCTTCTACCTGGGTGGGTTTCTAGTGGTGGAGATCCGTGCGGAGAAGGATGGCAAGGCATTCAATGTAATGGTTCGTTTATACAGAAAATTGTTCTAAACGGTGCAAATTTGGGAGGAGAGCTGGGCGATAAACTTGCAACATTTGTTTCAATCTCAGTAATCGATCTGAGCAACAACAACATTGGAGGAAGTATTCCATCCAATTTGCCAGCTACGATGAGAAACTTTTTTCTTTCAGCCAACCTGTTTACTGGAAGTATTCCAGCCTCTTTATCCGCTTTAACCGGACTGAGTGACATGTCTCTTAACAACAATCATTTAACCGGAGAAATACCAGATGCATTTTTGTCACTTACACAGTTGATCAATCTAGATTTATCGAGTAATAACTTGAGCGGGGAACTACCTCCTTCGATGGAGAACTTGTCATCTTTGACCACCTTGCGCTTGCAGGATAATCAACTATCTGGGACACTTGATGTTTTACAAGACCTTCCTCTGAAAGATTTGAATGTCGAAAATAACCAATTTACTGGCCCGATACCTCCAAAGTTGCTAAGCATCCCTAAATTCAGACAAGCTGGAAATCCATTTAATGATAATAATTCCACGTCAACTCGTGCTCCCGCACCTCGCTCCCCAGTGACAGCACCGCCAGGAGCACCACCAGGAGCACCGTTTTTTGTAGTACCATCTTCTGGTTCTGGCCCTGTACCTACCAAACAGGCTGATGGACCGACTGTAGCGACTGAGTCAAAGTCTGGGAAATCAAACAAACATACCAAAAAGGTGGTTTTGATATCTATTGGCAGTATTTTGGCATTCATTATTTTGGTACTAGCACTCGTTCTATTTATTCCAAGATGTGGTCGAAGAAGGGAACGGGTTGACCGAAGGTCCAGGCGACATCAAATTGGTGCATATGGAGATGAAAGACAACAAAATCCTAGGGATTTAGGGGCTATAGTTCAACCACCAATTCAACCAGAAAAAGTATCGATACCGACACGGGATGTCTTGAGGCCACATACTGATCGCCAAGAAGAGCCTAGGAGAGTGTGGGCTGTTCCAAATGTACAGGATAAGCCAGAGAAGGATGCGCAAAGAATGATGACAATACCAAAGCCGGTTCATCATGAGATTGATATCAGTACACCAGAAGTGTATTCTGTGCCTCCTCCTCCGCCTCCACCACCACCTCCTCCTCCGCCACCCCCACCTCCACCTCCTCCTGTTCTTCCTACTAAGAGGATGATTGTTGAGCCAACAATTCCTCATAGAGGAACTAGTGCCGGTCCATCCTCAAAAAGTTCTATTCCACCTCCTCCTACTTTTGCAAAATCTTTCACCATCGCATCCCTTCAACAGTACACAAATAGCTTTTCTCAAGAAAATCTTATAGGAGGAGGCATGTTGGGCACTGTTTACAGGGCAGAGCTACCTGGTGGGAAGCTACTTGCTGTAAAGAAACTTGACAGAAGAGCTTCTGTTCACCAGAAGGATGAAGAGTTTCTTGAATTGGTAAATAGTATCGACAGAATACGACATACAAATATTGTTGAGCTCATTGGATACTGTTCAGAGCATGGTCAAAGGCTTCTGATCTATGAGTACTGCAGTAATGGGTCACTACATGATGCACTTCACACAGATGAAGAATTCAAAGCAAAATTATCATGGAATGCTCGCATTCGGATGGCACTTGGGACAGCTAGAGCCTTAGAGTATTTGCATGAGCAATGTCAGCCGCCTGTGGTACACAGAAATTTAAAGTCTGCCAATATTCTCCTTGATGATGATCTATCTGTGCGTGTATCTGATTGTGGTTTAGCTCCATTGATAGCTTCAGGGTCTGTAATTCAGCTCTCGGGGAACCTGCTATCAGCTTATGGTTATGGAGCTCCAGAATTTGAATCGGGAACTTACACTTACCAAAGCGATGTATACAGTGTTGGAGTAGTTATGCTAGAACTTTTGACCGGCCGTCAATCCCATGACAGGACACGTCCACGAGGAGAGCAATTTCTTGCTAGATGGGCAATTCCCAAACTTCACGATATTGATGCGTTATCAAAGATGGTCGATCCTTCTTTAAATGGAGTTTACCCTGCAAAGTCATTGTCCAATTTTGCCGACATTATTGCTCAATGCCTTCAGCCGGGGCCCGAATTTAGGCCAGCAATGTCAGAGGTGGTCTTATACTTACTAAATATGATAAAGAGGGAGTCTCAAAAAAGTGATTCAAATGAAAAATGA 2406 0.4323 MDWKRSIMKIYGHVILLGFLFISIIQISTAVTDPTDVAALNSLYASLGSPLLPGWVSSGGDPCGEGWQGIQCNGSFIQKIVLNGANLGGELGDKLATFVSISVIDLSNNNIGGSIPSNLPATMRNFFLSANLFTGSIPASLSALTGLSDMSLNNNHLTGEIPDAFLSLTQLINLDLSSNNLSGELPPSMENLSSLTTLRLQDNQLSGTLDVLQDLPLKDLNVENNQFTGPIPPKLLSIPKFRQAGNPFNDNNSTSTRAPAPRSPVTAPPGAPPGAPFFVVPSSGSGPVPTKQADGPTVATESKSGKSNKHTKKVVLISIGSILAFIILVLALVLFIPRCGRRRERVDRRSRRHQIGAYGDERQQNPRDLGAIVQPPIQPEKVSIPTRDVLRPHTDRQEEPRRVWAVPNVQDKPEKDAQRMMTIPKPVHHEIDISTPEVYSVPPPPPPPPPPPPPPPPPPPPVLPTKRMIVEPTIPHRGTSAGPSSKSSIPPPPTFAKSFTIASLQQYTNSFSQENLIGGGMLGTVYRAELPGGKLLAVKKLDRRASVHQKDEEFLELVNSIDRIRHTNIVELIGYCSEHGQRLLIYEYCSNGSLHDALHTDEEFKAKLSWNARIRMALGTARALEYLHEQCQPPVVHRNLKSANILLDDDLSVRVSDCGLAPLIASGSVIQLSGNLLSAYGYGAPEFESGTYTYQSDVYSVGVVMLELLTGRQSHDRTRPRGEQFLARWAIPKLHDIDALSKMVDPSLNGVYPAKSLSNFADIIAQCLQPGPEFRPAMSEVVLYLLNMIKRESQKSDSNEK 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01215 801 MobiDBLite consensus disorder prediction 438 466 - -
Trre7g01215 801 MobiDBLite consensus disorder prediction 262 276 - -
Trre7g01215 801 Gene3D Transferase(Phosphotransferase) domain 1 589 801 - -
Trre7g01215 801 SUPERFAMILY Formin homology 2 domain (FH2 domain) 451 461 - -
Trre7g01215 801 Gene3D Ribonuclease Inhibitor 32 258 IPR032675 -
Trre7g01215 801 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 33 260 - -
Trre7g01215 801 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Trre7g01215 801 MobiDBLite consensus disorder prediction 244 261 - -
Trre7g01215 801 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 589 799 - -
Trre7g01215 801 Pfam Protein tyrosine and serine/threonine kinase 514 783 IPR001245 GO:0004672|GO:0006468
Trre7g01215 801 Gene3D Phosphorylase Kinase; domain 1 484 588 - -
Trre7g01215 801 ProSiteProfiles Protein kinase domain profile. 511 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01215 801 Pfam Leucine rich repeat 146 205 IPR001611 GO:0005515
Trre7g01215 801 SUPERFAMILY Protein kinase-like (PK-like) 484 785 IPR011009 -
Trre7g01215 801 MobiDBLite consensus disorder prediction 436 494 - -
Trre7g01215 801 SUPERFAMILY L domain-like 32 239 - -
Trre7g01215 801 MobiDBLite consensus disorder prediction 285 304 - -
Trre7g01215 801 MobiDBLite consensus disorder prediction 242 309 - -
Trre7g01215 801 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 73 782 - -
Trre7g01215 801 MobiDBLite consensus disorder prediction 478 494 - -
Trre7g01215 801 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 478 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01215 Trre-Chr7 8603241 8608603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01215 22 796 Strubbelig Receptor Gene Family AT4G03390 59.820 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Trre7g01215 PK_Tyr_Ser-Thr 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01215 - - mtr:25492087 1244.18