Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01209 ATGGATCCACCAAAATCTAAAGTAAAACGAGTGCTGTTCCTATGTTTTTCTCTTCTTCGGATGTCCATGGCGGACGATGGTGCTTTCATGTCAAAGCTATCGAAATCCCTGAGTCCTACCCCGTCAGGTTGGTCAGCGAGCAGCTCCTTTTGCACCTGGAATGGTGTAAAATGCGACGTAACCAACCGCGTAACATCTATTGATCTTGCTCACAAGTCACTCAATGGTACACTTCCTTCGAATCTCAACTCGCTTTCCCAACTCAGCTCCCTCTTTCTCAACTCCAACTCTCTCTCCGGCCCATTACCCTCACTCGCCAACCTCACCATGCTTCGAACAGTTTTCCTTGGCGGGAACTACTTCTCCTCCATCCCCGACAGTTGCTTCCAAGGACTAACCAGTCTCCAGGAACTCTCCATGGCCATCAACATCAACCTCGCTCCATGGACATTTCCCACTGAGTTGTCACAGTCTTCCAACCTCGTCTCACTTGACCTTGGACAAACCAACCTCGTGGGTAGCCTGCCGGATATATTCAATCCTTTAGTCAGTTTGCAGGACCTTCGTCTTTCATATAACAAACTAACGGGGGATTTGCCCATGTCTTTCTTGGGATCTGGGATTCGGAACTTGTGGATCAACAACAATCAGAACCCCAACAACATGTTCGGGTTCACAGGTTCTATTTCCGTGCTTGCTTCAATGATCCATTTGACTCAAGTTTGGCTTATGAAGAACAGCTTCACCGGTCAAATTCCTGATTTCACCAATTGTACCAATTTATTTGATCTGCAGCTTCGTGATAATCAGTTAACAGGTGTTGTTCCACCTTCTTTAATGGTTATGTCTAGCTTGCAGAATGTTTCCTTGGACAACAATTATTTGCAGGGCCCTTTTCCTTCTTTTGGGAAAGGTGTATCGTTCGATCTTGATGGGATGATTAATAGCTTCTGTCAAAACACATCTGGACCTTGTGATCCGCAGGTCACTACTTTGCTTCATGTTGCCGAAGATTTTGGGTATCCACTTCAATTGGCGAATTCTTGGAAAGGGAACGATCCCTGTCAAGGTTGGAGTTTCATTGTGTGTTCAGCAGGGAACATTATTACAGTGTACTTAGCCAAGCAGAAATTGGAGGGAACCATTTCACCTGCATTTGCAAATTTAACTGATTTGAGGAACTTGTACTTGAGTGATAACAATTTGACAGGTTCAATGCCTCAGAGCTTGACAAGTTTACTGCATCTTCAGGTTCTTGATGTATCTAACAACAATCTATCTGGGGAGATTCCTAAATTCTCATCTATGATAAGATTCAATTCAACCGGTAATGTTTTGCTTCAGCTTGGAAGTCTGTATAAAAACATAACCGCATCTGCGCCGTTGCTTAAAAACACAACTGCTTCTGCGCCGTTACTTAAAAACACAACTGCTTCTGCGCCGTTGCTGCCTTGGATTCTAGGGGCATCATTGTTTTGTGTAGGAGCTATACCGTTTATTGTGATTATTTGTAAACGTAAGGGATATCTAAGCTTAGTAAAAACAAGGATATTCAAGAAAACAAGAATATTTATTGATCACGATACTGAGGATTTCATAAAAAGATATAATTTGTCAGTGCCGAAGCGGTATAGTTATGCAGAAATTAAAAGGTTCACAAACTCATTTCGAGATAAGTTGGGTCAAGGAGGATATGGTGTTGTGTACAAAGCCAGTTTACCCGATGGTCGTCATGTAGCGGTGAAAGTAATAAGCAAGTGTAAGGGAAACGGAGAAGAATTTATAAACGAAGTTGCAAGCATAACTAAAACATCACATGTGAACATTGTCTCACTTTTGGGTTTTTGCTATGAGAAGAACAAAAGAGCATTGATATATGAACTCATGTCCAATGGATCATTAGATAAGTTCATATATCGAAGTGGATTTCCAAATGCTATTTGTGATTTGGATTGGAACACACTGTTCCAAATTGTACTTGGCATTGCTCGAGGACTAGAGTACTTACATCAAGGTTGTATTTCAAGAATTTTTCATCTTGATATTAAACCTCAAAATATTCTTTTAGATGAAGATTTTTGCCCAAAAATATCTGATTTTGGTTTGGCTAAAATATGTCAAAAGAAAGAGAGTATTGTGTCAATGCTTGGCACAAGAGGAACTGTAGGCTACATTGCACCAGAAGTATTTAGTCGAGTATTTGGGGGAGTTTCTTCTAAGTCTGATGTATACAGTTATGGCATGTTGATTCTTGAATTGACTGGAGGAAGAAAAAATTATGACAATGGAGGATCTCATACGACCGAAATGTACTTTCCAGATTGGATATATAAGGATCTTGAGCAAGGTAATACTCATTTAACTAGTTTGGTAATCTCAGAAGAAGAAAATGATATGGTGAGGAAGATTACTATGGTGAGTTTGTGGTGCATTCAAACGAATCCATCAGATAGACCACCAATGAGTAAAGTAATAGAAATGCTACAAGGACCACTTCATTCAATGCCTTATCCTCCAAAGCCTGTCTTATTTTCACCAAAAGGGCCATCGTTACAAATGTCAGATATGTCTTCCAGTAATTTTAACGACTCAAATTCAATTATGATAGAGAAAGAATAA 2619 0.4028 MDPPKSKVKRVLFLCFSLLRMSMADDGAFMSKLSKSLSPTPSGWSASSSFCTWNGVKCDVTNRVTSIDLAHKSLNGTLPSNLNSLSQLSSLFLNSNSLSGPLPSLANLTMLRTVFLGGNYFSSIPDSCFQGLTSLQELSMAININLAPWTFPTELSQSSNLVSLDLGQTNLVGSLPDIFNPLVSLQDLRLSYNKLTGDLPMSFLGSGIRNLWINNNQNPNNMFGFTGSISVLASMIHLTQVWLMKNSFTGQIPDFTNCTNLFDLQLRDNQLTGVVPPSLMVMSSLQNVSLDNNYLQGPFPSFGKGVSFDLDGMINSFCQNTSGPCDPQVTTLLHVAEDFGYPLQLANSWKGNDPCQGWSFIVCSAGNIITVYLAKQKLEGTISPAFANLTDLRNLYLSDNNLTGSMPQSLTSLLHLQVLDVSNNNLSGEIPKFSSMIRFNSTGNVLLQLGSLYKNITASAPLLKNTTASAPLLKNTTASAPLLPWILGASLFCVGAIPFIVIICKRKGYLSLVKTRIFKKTRIFIDHDTEDFIKRYNLSVPKRYSYAEIKRFTNSFRDKLGQGGYGVVYKASLPDGRHVAVKVISKCKGNGEEFINEVASITKTSHVNIVSLLGFCYEKNKRALIYELMSNGSLDKFIYRSGFPNAICDLDWNTLFQIVLGIARGLEYLHQGCISRIFHLDIKPQNILLDEDFCPKISDFGLAKICQKKESIVSMLGTRGTVGYIAPEVFSRVFGGVSSKSDVYSYGMLILELTGGRKNYDNGGSHTTEMYFPDWIYKDLEQGNTHLTSLVISEEENDMVRKITMVSLWCIQTNPSDRPPMSKVIEMLQGPLHSMPYPPKPVLFSPKGPSLQMSDMSSSNFNDSNSIMIEKE 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01209 872 Pfam Protein kinase domain 558 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01209 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Trre7g01209 872 Pfam Leucine rich repeat N-terminal domain 326 364 IPR013210 -
Trre7g01209 872 Pfam Leucine rich repeat N-terminal domain 28 59 IPR013210 -
Trre7g01209 872 Gene3D Transferase(Phosphotransferase) domain 1 629 835 - -
Trre7g01209 872 Gene3D Phosphorylase Kinase; domain 1 522 628 - -
Trre7g01209 872 FunFam serine/threonine-protein kinase PBS1-like 525 628 - -
Trre7g01209 872 MobiDBLite consensus disorder prediction 850 866 - -
Trre7g01209 872 FunFam Receptor-like kinase TMK4 24 323 - -
Trre7g01209 872 Pfam Leucine rich repeat 371 426 IPR001611 GO:0005515
Trre7g01209 872 ProSiteProfiles Protein kinase domain profile. 554 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01209 872 Gene3D Ribonuclease Inhibitor 27 325 IPR032675 -
Trre7g01209 872 ProSiteProfiles Leucine-rich repeat profile. 415 437 IPR001611 GO:0005515
Trre7g01209 872 FunFam PR5-like receptor kinase 629 838 - -
Trre7g01209 872 SUPERFAMILY Protein kinase-like (PK-like) 536 828 IPR011009 -
Trre7g01209 872 ProSitePatterns Protein kinases ATP-binding region signature. 560 582 IPR017441 GO:0005524
Trre7g01209 872 MobiDBLite consensus disorder prediction 846 872 - -
Trre7g01209 872 PANTHER OSJNBA0070M12.3 PROTEIN 12 829 - -
Trre7g01209 872 Gene3D Ribonuclease Inhibitor 327 449 IPR032675 -
Trre7g01209 872 SMART LRR_typ_2 108 131 IPR003591 -
Trre7g01209 872 SMART LRR_typ_2 182 205 IPR003591 -
Trre7g01209 872 SMART LRR_typ_2 389 412 IPR003591 -
Trre7g01209 872 SMART LRR_typ_2 413 435 IPR003591 -
Trre7g01209 872 SUPERFAMILY L domain-like 33 436 - -
Trre7g01209 872 FunFam Leucine-rich repeat receptor-like kinase 327 449 - -
Trre7g01209 872 SMART serkin_6 554 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01209 Trre-Chr7 8558605 8561411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01209 542 865 Receptor kinase-like Gene Family AT5G38280 58.610 2.89e-130 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trre7g01209 Pkinase 7.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01209 - - tpra:123922127 1040.02