Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01141 ATGAATAGCAGTAACGGAGGAGGGATGATGGGTTTCAGTAAATCAGCAGCAGCATCAGCATCACCTTTCACAGTGTCTCAGTGGCAGGAACTTGAACATCAAGCTTTGATCTTTAAATATATGGTTGCTGGTCTTCCTGTTCCACCTGATCTTGTCCTTCCTATTCAGACCACTTCCTTTCACTCCAACAATTTCTTTCATCATCCTATTCCTACCTTGAGTTATTGTTCCTTCTATGGGAAGAAGGTGGACCCCGAGCCAGGGCGATGTAGGAGGACTGATGGAAAAAAATGGAGGTGCGCGAAGGAAGCATACCCAGACTCCAAGTACTGTGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTATGGCACAGTCGTCATCCACTGTGACATCTCTGACTGTCGCTAGTGGCAGCAGCAGAGCTGGAAACTACCAGAACCTTCCCACAACAAATGCCTTTGGTAGTCCTCAAAATACTACTGCTTCTGGAACAGACCGCGCCGATTATCATCTTGATACCATTCCCTATGGGATTCCAAGTAAAGAATACAGGTATCTTCAAGGTCTTAAATCTGAGGGTGGAGAACATAGCTTCTTTGCAGAAGGTTCAGGAGGAGGCAACAACAAGGGTCTCCAAATGGAGTCGCAGCTGGAAAATGCATGGCCTTTGATGTCAACCAGAGTTTCCTCTTATTCTGCATCAAAATCGAGTAATAATTCCATGTTGCAAAGTGGTTATCCCCATCATTCATTTTTATCTAGTGAATATGGATCTGGTGAAGCTGTGAAGGAAGAAGGCCAGCCTCTTCGACCCTTTTTCAACGAATGGCCTAAGAGCAGGGAGTCATGGTCAGGTTTAGAAAATGAGAGATCCAACCAAACAGCCTTCTCCACAACTCGACTCTCAATATCCATACCTATGTCATCTTCTGACTTCTCCACCACAAGCTCTCAGTCGCCACATGATAACTAG 999 0.4595 MNSSNGGGMMGFSKSAAASASPFTVSQWQELEHQALIFKYMVAGLPVPPDLVLPIQTTSFHSNNFFHHPIPTLSYCSFYGKKVDPEPGRCRRTDGKKWRCAKEAYPDSKYCERHMHRGRNRSRKPVESQTMAQSSSTVTSLTVASGSSRAGNYQNLPTTNAFGSPQNTTASGTDRADYHLDTIPYGIPSKEYRYLQGLKSEGGEHSFFAEGSGGGNNKGLQMESQLENAWPLMSTRVSSYSASKSSNNSMLQSGYPHHSFLSSEYGSGEAVKEEGQPLRPFFNEWPKSRESWSGLENERSNQTAFSTTRLSISIPMSSSDFSTTSSQSPHDN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01141 332 PANTHER GROWTH-REGULATING FACTOR 5 14 320 IPR031137 GO:0005634|GO:0006351|GO:0032502
Trre7g01141 332 MobiDBLite consensus disorder prediction 125 175 - -
Trre7g01141 332 ProSiteProfiles WRC domain profile. 84 128 IPR014977 -
Trre7g01141 332 MobiDBLite consensus disorder prediction 116 175 - -
Trre7g01141 332 SMART QLQ_2 21 57 IPR014978 GO:0005524|GO:0005634|GO:0006355
Trre7g01141 332 Pfam WRC 85 127 IPR014977 -
Trre7g01141 332 MobiDBLite consensus disorder prediction 289 309 - -
Trre7g01141 332 ProSiteProfiles QLQ domain profile. 22 57 IPR014978 GO:0005524|GO:0005634|GO:0006355
Trre7g01141 332 MobiDBLite consensus disorder prediction 295 309 - -
Trre7g01141 332 Pfam QLQ 22 56 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01141 Trre-Chr7 7723570 7727276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01141 9 127 GRF Transcription Factor Family AT3G13960 58.065 3.53e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Trre7g01141 WRC 2.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01141 - - gmx:100787226 461.07