Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01136 ATGATTCAAAATGCTGATATGAGACTTGAATCAGGGACTTGTAACGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATTTTAATCAAGCTACTATGGGGTCAAAGGCTGAAGAATACTCTGATGAAAACTGTCGCTTAGTGGAGGACAAACGTTATTCTACAGACGAGGGTGATGAATCTTATGTTAGGAGCAGAACTTGTGAAAGATTGAAGCATTCTGGCAGTGAAACCAGTAACATGCCTAGTATTTTCTCCAGTCATGATTCTCTATCTGAAAATACCAAGAGTAAACAGGCCTTTTCAGAAAAGTGTCAGGATTCTAAGTGCGTAGAAGGTCTTGATGAAAGCATTAATTGTATCAGTAGACCCGGTAATACTAATTTAGTGAGTTGTAGTAATCAAATAAATTCAGACAAAATAAATATATCTTCTAGTTCAGCTTCAGTTAGTCTCTTTGGGGAACAAGGGTCTGGAATTGCGCAACCTGTTGATATCTCTGGTTCGTCTGAGATTCTCTCTAAATATGCGGACTTTCCAAAAAAATTGTCAGAATGCTGTACAGAAAATGTTGATTCATCATTGACCAAAGAGAGAAAACCTATTATTGTTTCTGGTGAAAAATCTCTTCCAGATAAGGATGAACTTGTTAGTGATACAGCCAAAGTGTCACGAAAAATGTATCCAAAGTCAGAAGCTGATGCTGACAATGTTGTTAGTGTTGCTGAAGATGGGGATCATAAACATTCAGCCCATGATGGACTGCATGAGAAGGCTGAGGAACGGATTAACTCGCTTGGGATATCTGTACCTCAACCAGAAGATGAGAGTGATGAGTCAGATGTTATTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATTCTGGTCAAGAGAAACTACTTGCCATATGTAGTAGGTGCAGTGATGGTGCAGAGCACACATACTGCATGCGGGAAAAGCTTCAAAAGGTGCCTAAAGGGGATTGGTTTTGTGAGGAATGTCAATGTGCTGAGGAGACTACTAATCAAAGATTGGGAAAAAATAGTCATAAAGTTGGTTCCAGTTCTCAAATATCTGGCAAAAGGTCCTCTGAAATCATGGAAGTAGCTGAAGCAGCAAAGAGGCGAGCCCTCGAATCAAACACAGGATCACCGAAGGCATCGGCATCAAGCCCCAGGAGATTAGTTCCACTGTCACGAGAGTCTTCATTCAAGAACTTAGACAATGGAAAGGTGAAACCTGGTCAAACTTCAAGGAGAATGGGTTCATTGTTGAAGTGTAGTTCATTCAACAACTTCAATTCCAAATCAAGAGTCAAACTTGATGATGATGTTAGGCAAAAGCAGAAAGGGGGTGGTGAACATGTTTCTAAGAACATGGAGACACCTGGTGGGACAGTAGGAAAATCAATGTCATTCAAATCGTCAAATTTGGGCCGTGATACTGTATCAAAAGTTAAAATGCTTTCTCCCAAGTCTGGAACTTCTCAGAATTTGAAAGGATCAAGCCTTGCAAAAGAATCGGCTGTATTTGAAAGGAAATCTCTGTCTAGGATTGATCGGCCTGTCGTTTGTTCCACAATGGCTAGTTCTGTCATTTCCACATCTAAGCATGATCAGAAGTTTGCACCTCATGGTGAAACTGCTCAACCTTTAGCAACTAACTGCAACCAGGAGTATAAAGTTAACCATGATGGGAAGTCAAGTTCATTATCAAAGCCTGTGAATAGTATAAGCAACAAAATCCCAGAACCTCAAGTTATTTCAGAGAGAACGTCAACCAGTGGGTATGAAACTCGACAGGATGGGCTGCTTCGATCACGAGAAACAGCAAATCAGGTTGACAAAACAAAAGATAGTTATACTCGTCGTGTGAGGTCAGGTACTAATGCTTCAACATCTCCGTTCTGTCGCAAATGTAAAGATTATGGCCATGCTACAGAATGTTGCACAGTTGGTGGAACACATGAATTTGGTGCTGACAGACCGGTTACTGCCACAAGTAGTTCAAAAGAGTTGCATAAAGGTAGTAGACTGAAAGCTGCAATCCAGGCAGCTTTGCTTAAAAGGCCTGAAATACACAAGAAGAAAGATCCACATGATCAGTTTGCTACATCAGACACAGTCTTGAAATGCAAAATCAGTTCTCAAAACCAAGTGGAGGTCTCTGCTTCTAACACACTGAAAAATAGTATTTCTGTTGAAGAAACCAATCTGAGGCCTGGAAGGCAGAATTCTACATTTGAAACGTCCAAATGTTTGTCTCCCAATGATTTGAATCACATTAAAACTGAATTGTGCTCTCAACTGAAGAATTCAGATTCTATTAGTCCTTCTTCTGAAAAGCCTGCAGTGAGAGACTTGCCTAATCTTTTTTTGGCAATCTCAAGTGTTACTTCAGAGATGTCAGCCGTTCCAGAATACAAATACATATGGCAGGGTGTCTTTGAAGTGAGTAGAAGTGGAAAATCTCCCGACCTTTATACCGGAATTCAAGCACATTTATCCTCATGCGCTTCCCCAAAGGTTCTTGATGCAGTCAACAAGTTTTTACCTGAAATTTCCCTGCATGAAGTTTCTCGCTTGAGCACCTGGCCTTCACATTTTCATCAATGTGGTGCTAAAGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACATTGAAAGTTATGAGAGACACTACAAGAGTCTATTGGATCACATGATTAGACATGATTTAGCACTCAAAGGGTTTATTGATGGCGTTGAACTTCTCATATTTGCTTCCAATCAGCTTCCTGAAAATTCACAGCGTTGGAATATGTTATTTTTCTTATGGGGAATATTTAGAGGGAGGAAGATTAATCCTTCAGATTCTGCAAAAAATATTGTTTTACCAACTTTGAACGTGGCGGTGCCAAATGAGAAGGATTTTCCGACTGCTGTCATGACCTTGTCTGATACTCGCTGTTCACCAGTGCGCATCGATGAAGAATCAATAGCTTGTGGTAAAGCTTGCAATGAACTTCCAGCCACTTCCATTGACCAAGGTCATATTGTGCCAAGTAAGGATTTTGATACAAAAGACACTATTTTTGACCAGACACATTTGGGTTCACAAGTAAACTTTGATAGGCAAGATAGTAGAATCAACAACACCAAGTCTTCGTCAAGGATTTCAACAAACGTTATACAACCATGTCGAGAAATGAATATCATTGATTCGTCCCTGAAAGAGAAAGGTAGTTTGTCAGAGCATGGACTGCACAGAGAGTCTAAATCTCCTGAAGAGGCGGGAACAATTGTAAGGGCTATGATTGTGGAAACAAAACCTAATTATAGTATTTCTGTCAAGCAAGAGAACCCCATATCTTCAAGGATTCCTTATCTTGACAATCAAGAGATACTCCCTGCAAACAGCACCCTGAAAGATAAAATTTCAGAGAGAACAAACAATGATGAAAATCAACGAAGGCCTAAAAGGAAAGAGAGAGAAGATGATCTCAATACTAATGTGGAAGCAACATTTCAGGGAGATCTGGCAATAGAAGCAGCAAACTGTCGGCTACCTAATGATATAAAAGTTGAGCATACAGACCATTCAAACACAGTTATGGAGGCTCCTGCAGCTAGTTGTCAGGAAATGCCTCGGACTAAGATGAATAAAAAGTTGGAAGATACAGACAGTTCTAGCAAGCTGCAGTCAGGTTTCAGTGGAATCTATGGGTGTTACAATTCTGTAGCTAGGGATTCTTTTACTGGGAGTTCTGCATCACTTGCAAATGATTTTGGTTCCTCTTCTTCAGTTGAAGATAAAGGATGCAAAGAATCTTGTGATGAGAAAATCATTCATGAGGACCTTGGAACGAAGGAAAAAACCTTCTTCCCTATTGATACACACAATACAACTGACTCGCGATTGGTGCTGAATAACATTTCAATGAAAGGGACTCATGAGTGCGGTGAGAAATTTGAAGTTGGGATACCGAGTCTTGAGCTTGCGTTGGGGGGTGAAATGAAACAGTCAAAGAACGGTACACTTCCTTTCCTTGCTGAGAAAGCTGAGAAAAAAAATAACCAGGAAAAGACTCCAGATTGTTTGGAAGCTGAGCAAGAGGATGATGACCATGTTGCAGCATCTCTTTCCCTATCTCTATCTTTCCCATCTTCAAACAAGGAAACCACATTACCTGCTTCAAAAGATGAGAATCACATGAATTCTTCATTGCTCCTTTTTGGGAAATTCACTGGCAAATAA 4239 0.402 MIQNADMRLESGTCNVCSAPCSSCMHFNQATMGSKAEEYSDENCRLVEDKRYSTDEGDESYVRSRTCERLKHSGSETSNMPSIFSSHDSLSENTKSKQAFSEKCQDSKCVEGLDESINCISRPGNTNLVSCSNQINSDKINISSSSASVSLFGEQGSGIAQPVDISGSSEILSKYADFPKKLSECCTENVDSSLTKERKPIIVSGEKSLPDKDELVSDTAKVSRKMYPKSEADADNVVSVAEDGDHKHSAHDGLHEKAEERINSLGISVPQPEDESDESDVIEHDVKVCDICGDSGQEKLLAICSRCSDGAEHTYCMREKLQKVPKGDWFCEECQCAEETTNQRLGKNSHKVGSSSQISGKRSSEIMEVAEAAKRRALESNTGSPKASASSPRRLVPLSRESSFKNLDNGKVKPGQTSRRMGSLLKCSSFNNFNSKSRVKLDDDVRQKQKGGGEHVSKNMETPGGTVGKSMSFKSSNLGRDTVSKVKMLSPKSGTSQNLKGSSLAKESAVFERKSLSRIDRPVVCSTMASSVISTSKHDQKFAPHGETAQPLATNCNQEYKVNHDGKSSSLSKPVNSISNKIPEPQVISERTSTSGYETRQDGLLRSRETANQVDKTKDSYTRRVRSGTNASTSPFCRKCKDYGHATECCTVGGTHEFGADRPVTATSSSKELHKGSRLKAAIQAALLKRPEIHKKKDPHDQFATSDTVLKCKISSQNQVEVSASNTLKNSISVEETNLRPGRQNSTFETSKCLSPNDLNHIKTELCSQLKNSDSISPSSEKPAVRDLPNLFLAISSVTSEMSAVPEYKYIWQGVFEVSRSGKSPDLYTGIQAHLSSCASPKVLDAVNKFLPEISLHEVSRLSTWPSHFHQCGAKEDNIALYFFAKDIESYERHYKSLLDHMIRHDLALKGFIDGVELLIFASNQLPENSQRWNMLFFLWGIFRGRKINPSDSAKNIVLPTLNVAVPNEKDFPTAVMTLSDTRCSPVRIDEESIACGKACNELPATSIDQGHIVPSKDFDTKDTIFDQTHLGSQVNFDRQDSRINNTKSSSRISTNVIQPCREMNIIDSSLKEKGSLSEHGLHRESKSPEEAGTIVRAMIVETKPNYSISVKQENPISSRIPYLDNQEILPANSTLKDKISERTNNDENQRRPKRKEREDDLNTNVEATFQGDLAIEAANCRLPNDIKVEHTDHSNTVMEAPAASCQEMPRTKMNKKLEDTDSSSKLQSGFSGIYGCYNSVARDSFTGSSASLANDFGSSSSVEDKGCKESCDEKIIHEDLGTKEKTFFPIDTHNTTDSRLVLNNISMKGTHECGEKFEVGIPSLELALGGEMKQSKNGTLPFLAEKAEKKNNQEKTPDCLEAEQEDDDHVAASLSLSLSFPSSNKETTLPASKDENHMNSSLLLFGKFTGK 1412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01136 1412 SMART PHD_3 288 335 IPR001965 -
Trre7g01136 1412 MobiDBLite consensus disorder prediction 438 478 - -
Trre7g01136 1412 MobiDBLite consensus disorder prediction 1376 1397 - -
Trre7g01136 1412 MobiDBLite consensus disorder prediction 1140 1163 - -
Trre7g01136 1412 MobiDBLite consensus disorder prediction 374 423 - -
Trre7g01136 1412 MobiDBLite consensus disorder prediction 1134 1163 - -
Trre7g01136 1412 MobiDBLite consensus disorder prediction 463 478 - -
Trre7g01136 1412 MobiDBLite consensus disorder prediction 1074 1091 - -
Trre7g01136 1412 PANTHER - 286 960 - -
Trre7g01136 1412 MobiDBLite consensus disorder prediction 438 455 - -
Trre7g01136 1412 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 222 349 IPR013083 -
Trre7g01136 1412 SUPERFAMILY FYVE/PHD zinc finger 276 339 IPR011011 -
Trre7g01136 1412 MobiDBLite consensus disorder prediction 1074 1093 - -
Trre7g01136 1412 MobiDBLite consensus disorder prediction 1349 1397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01136 Trre-Chr7 7681763 7688197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01136 285 345 C2H2 Transcription Factor Family AT3G01460 32.787 1.96e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01136 - - mtr:25479298 2156.33