Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01135 ATGTCTACAGCCAAACAGGTTATTACATGCAAAGCTGCGGTATGCTGGGGGGCAGGAGAGCCAGTGAAATTGGAAGAGATACAAGTAGATCCACCAAAGGCAACAGAAGTACGAGTTAAGATGTTGTGTTCCAGTATCTGCCACACAGACATCTCAAGCCTTAAAGGATTCCCACATAATCAATTTCCTCTAGCACTTGGACATGAAGGAATTGGTGTTATTGAGAGTGTTGGTGATGAAGTAACAAATCTAAAGGAAGGTGATTTTATTCTTCCAACATACATAGGAGAATGTGGAGAATGTGAGAATTGTGTTTCAGAAAAAACCAATTTGTGTTTAACACATCCTGTGAGATTGACTGGTCTAATGCCAGATAACACTTCAAGGTTGTCTGTAAGAGGTCAAAAACTATACCATGTTTTGAGTTGTGCTACATGGTCAGAGTATGTGGTTGTTGATATCAACTACCTTGTCAAAGTTGATCCAACCATTGATCTAGCTTATGCTAGTTTCATCTCATGTGGGTTTTCAACTGGTTATGGAGCTTCTTGGAAAGAAGCTAATATTCAAAGTGGTTCAACTGTTGCTGTTTTTGGTCTTGGTGCTGTTGGATTAGGGGCTATAAGTGGGGCCAAGATGATGGGAGCAAGTCAGATAATTGGGGTTGACAAAAATGTGATGAAGAAAGAAATAGGAGAAGCTTTTGGAATGACTCACTTTATAAATTCTAATGTTCCTGATAAATCTTGTTCAGATTTGGTTAAAGAGTTAACTGGAAGGGGTGTAGATTATTGCATTGAATGCACTGGAGTTGCACCTTTGCTTACTGAATCTTTGGAAGCCACAAAAGTGGGAACTGGTAAAGCAATTGCAGTTGGTATGGGAGTTGAACTTGTTATACCATTTGGAATTCTTGGCATTCAGTTTGGTAGAACCTTAAAAGGTTCTGTTCTTGGAGGTATAAAAACCAAAACAGATATTGCCACCATAGTGAACAAATGTCAAAAAGAGGAATTCCCTCTTCAAGAACTTTACACACATGAGGTCTCTTTGGTAGATATAGGCAAATCATTTGAGTTGTTGAAACAACCAAATTGTGTGAAAGTTGTTATCAAGATGTGA 1122 0.3868 MSTAKQVITCKAAVCWGAGEPVKLEEIQVDPPKATEVRVKMLCSSICHTDISSLKGFPHNQFPLALGHEGIGVIESVGDEVTNLKEGDFILPTYIGECGECENCVSEKTNLCLTHPVRLTGLMPDNTSRLSVRGQKLYHVLSCATWSEYVVVDINYLVKVDPTIDLAYASFISCGFSTGYGASWKEANIQSGSTVAVFGLGAVGLGAISGAKMMGASQIIGVDKNVMKKEIGEAFGMTHFINSNVPDKSCSDLVKELTGRGVDYCIECTGVAPLLTESLEATKVGTGKAIAVGMGVELVIPFGILGIQFGRTLKGSVLGGIKTKTDIATIVNKCQKEEFPLQELYTHEVSLVDIGKSFELLKQPNCVKVVIKM 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01135 373 CDD liver_alcohol_DH_like 8 372 - -
Trre7g01135 373 Gene3D - 179 316 - -
Trre7g01135 373 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
Trre7g01135 373 Pfam Zinc-binding dehydrogenase 202 322 IPR013149 -
Trre7g01135 373 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 316 - -
Trre7g01135 373 Gene3D - 13 368 - -
Trre7g01135 373 PANTHER ALCOHOL DEHYDROGENASE 6 365 - -
Trre7g01135 373 SMART PKS_ER_names_mod 17 371 IPR020843 GO:0016491
Trre7g01135 373 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Trre7g01135 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 334 IPR036291 -
Trre7g01135 373 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Trre7g01135 373 SUPERFAMILY GroES-like 3 189 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01135 Trre-Chr7 7677075 7679712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01135 36 174 Monolignol Biosynthesis Gene Families AT4G37970 31.206 3.67e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01135 K00121 - gmx:100798341 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01135 7 7677075 7679712 Trre7g01135 7 7677075 7679712 ECH