Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01081 ATGGGCTACCTCAATCTTTCTTGCAAAGCTCAATCTTCAATTTCAACCTCAAATTCTCTATCACCATCATCATCTTCATCAAAACCAAACAAAGACAAAGACAAAGAAAAAACCATCAAGATCCAACAGTTTCAATACAGTGATCTTGAAGCTGCAACAAATGGTTTCTCAGACAACAAACTTCTTGGTAAAGGTAGCCATGGTTATGTCTACAAAGCAATTGTTCATGGTAAACCTGTAGCTGTAAAAAGACCATCTAGACCTCACTCTCTTAGAACACCCATCTCATCATCTTCACCTGAAATCACCAATGAAGTCGATAACGAAATCGATATTTTATCCAAAATTCAAAGTCCCAGGTTGGTTAATCTTGTTGGTTTTACAAATGATTCAAAAGATAGACTTTTGGTTGTTGAATTTATGTGTAATGGTACCCTTTTTGATGTTCTTCATTCTTCTTCAAGAACCCTTAATTGGGGTAGAAGAATTCGTTTAGCTTTACAAACTGCTAAAGCTATTGATATACTTCATTCATCAAATCCACCTGTTATTCATAGAGATATTAAATCTGCTAATGTTCTTATTGATCAAAATTATAATGCTAGATTAGGTGATTTTGGTTTAGCATTAATGGGTTTTGATAGGGTAAGGTCAACTCCACCTGCTGGTACTATGGGCTATCTTGATCCTTTTTATGTTACTCCTGATAATTTGAGTACTAAGATTGATGTTTTTAGTTTTGGGATTTTGTTGTTGGAGATTATAAGTGGAAGGAAAGCAATTGATGTTGCTTATTCGCCGCCGTCTGTTGTTGATTGGGCTATTCCACTTATTAAGAAAGGGAAAATTTTTGCTGTTTATGATCCTAGAATACCACCTCCTAAGGATGTTTTTGTGAGGAAACAATTGGCTTTGATTGCGGCGAAATGTGTTAGATCTTGTAGGGAAAGAAGGCCTTCGATGAACGAGGTTGTTAATTGGCTATGTGGGTTGTGTAAATTGGTACCGAATCATTCGTGGAATGGTTTTAATATTAATATTAATAACCCTTGTATGATGGTTGAATCCGTTGGACGTCCGGTTGAACCGAGAAACAGACAGTTAGGTAGTTCGAGGTTTGCGGAAGAAGGGAATTTTGCTGGTTTGGATGCTAGATTGTCGAAGTCTGCATTGAGATATTCGAGGAGAGTGTATTCGGATTTGGGGTTTAGCAGTAATTTGATGGATCTTATGGCTACGACTGAGGAGACGGAATTTATACGAGATGCTAATGGTGTTGTTCAACCTAGTTCTTCTAAATCAGTTGAACAAGTTTCTAGTTCTAGATTTGGAAGTGGAAGATATTTTGCAAGAGGTAAAAATCTATACAGGCCTTGTGGTACTGATAAAGATGCTTTTGGATTGAGTAAAGGCCAGATTGTTGGGGAGAATTCTTCGAATTTAAAGCAGGATGAGGTTTCTGGATCAACTTTGACTTCTCTTGCAACTGAGGTTATCTAG 1500 0.37 MGYLNLSCKAQSSISTSNSLSPSSSSSKPNKDKDKEKTIKIQQFQYSDLEAATNGFSDNKLLGKGSHGYVYKAIVHGKPVAVKRPSRPHSLRTPISSSSPEITNEVDNEIDILSKIQSPRLVNLVGFTNDSKDRLLVVEFMCNGTLFDVLHSSSRTLNWGRRIRLALQTAKAIDILHSSNPPVIHRDIKSANVLIDQNYNARLGDFGLALMGFDRVRSTPPAGTMGYLDPFYVTPDNLSTKIDVFSFGILLLEIISGRKAIDVAYSPPSVVDWAIPLIKKGKIFAVYDPRIPPPKDVFVRKQLALIAAKCVRSCRERRPSMNEVVNWLCGLCKLVPNHSWNGFNININNPCMMVESVGRPVEPRNRQLGSSRFAEEGNFAGLDARLSKSALRYSRRVYSDLGFSSNLMDLMATTEETEFIRDANGVVQPSSSKSVEQVSSSRFGSGRYFARGKNLYRPCGTDKDAFGLSKGQIVGENSSNLKQDEVSGSTLTSLATEVI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01081 499 PANTHER OS01G0253100 PROTEIN 20 330 - -
Trre7g01081 499 Gene3D Phosphorylase Kinase; domain 1 26 140 - -
Trre7g01081 499 Pfam Protein kinase domain 57 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01081 499 FunFam Serine/threonine-protein kinase-like protein 141 341 - -
Trre7g01081 499 Gene3D Transferase(Phosphotransferase) domain 1 141 340 - -
Trre7g01081 499 FunFam Serine/threonine-protein kinase-like protein At1g28390 23 140 - -
Trre7g01081 499 MobiDBLite consensus disorder prediction 1 36 - -
Trre7g01081 499 SUPERFAMILY Protein kinase-like (PK-like) 39 349 IPR011009 -
Trre7g01081 499 SMART serkin_6 56 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01081 499 ProSiteProfiles Protein kinase domain profile. 56 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01081 499 ProSitePatterns Protein kinases ATP-binding region signature. 62 83 IPR017441 GO:0005524
Trre7g01081 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Trre7g01081 499 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01081 Trre-Chr7 7230336 7231835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01081 5 373 Receptor kinase-like Gene Family AT3G59420 39.211 5.14e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Trre7g01081 Pkinase 3.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01081 - - vum:124832395 738.413