Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01079 ATGCAGAAACAAGAAGTTAGAGAAGAGGAAAATAATAGTGACAAAAAAGAAGAGAAAAATGACCAACCTCCATTAATGGCATTAAATCATATTTCAAGGCTTTGTAGAAATGTGAACGAGTCTATAGACTTTTATACAAAGGTGTTGGGGTTTGTTTTGATTGAGAGGCCACCCGTTTTGGATTTTGAAGGTGCTTGGTTATTCAATTATGGAGTTGGTATCCATTTGGTGCAGTCCAAAGAAGAAGAGAAATTGCCTTCTGATACTCAACAACATGATTTGGATCCTCAAGACAATCATATATCATTTCAGTGCGAAGATGTAGATGGTATGGAGAAAAAATTGAAGGAGATGAATGTGAAGTATAAGAAAAGGACTCTAGATGCAGAAGATGGAACAACAATGGATCAACTTTTCTTCAACGACCCAGATGGATTTATGGTGGAAATATGTAACTGTGAGAATTTAAAACTCATCCCTGCTAATTCACGAGGCAAAATAAAGCTTCCAAGGGATCGCCACACACCACCTGTGGATGCGGACAATCAAAATGAGCATGATAATTAA 567 0.3704 MQKQEVREEENNSDKKEEKNDQPPLMALNHISRLCRNVNESIDFYTKVLGFVLIERPPVLDFEGAWLFNYGVGIHLVQSKEEEKLPSDTQQHDLDPQDNHISFQCEDVDGMEKKLKEMNVKYKKRTLDAEDGTTMDQLFFNDPDGFMVEICNCENLKLIPANSRGKIKLPRDRHTPPVDADNQNEHDN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01079 188 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 28 150 IPR004360 -
Trre7g01079 188 CDD VOC_like 28 150 - -
Trre7g01079 188 Gene3D - 29 153 IPR029068 -
Trre7g01079 188 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 24 153 IPR029068 -
Trre7g01079 188 MobiDBLite consensus disorder prediction 1 23 - -
Trre7g01079 188 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 27 153 IPR037523 -
Trre7g01079 188 PANTHER - 15 184 - -
Trre7g01079 188 MobiDBLite consensus disorder prediction 1 25 - -
Trre7g01079 188 MobiDBLite consensus disorder prediction 167 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01079 Trre-Chr7 7206148 7207854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01079 41 163 Calmodulin-binding Proteins AT1G08110 24.000 1.85e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01079 - - aip:107629668 274.248