Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01073 ATGAGCAAAGCAATTAGTTCTTCTCTTCTTATATCTTTTCTAATTTTTTCATATTTTGTGATTGAAATCAATGGAAACAAACAAGTTAAAGCTCTTGACAATCTTCACAAAGAAAAATATAGAGTAAATTCACAAATTGATAAGAGTGAGTTTGAGGTACAAGATATTGTGTATGAAGAAGCTATTGTTCATTCTCAAGAAGGACTTAAAGAGAAAGATAGGATTAAGAGGCTACCAGGGCAACCCTTTGTGAAATTCTCTCAATTTGGAGGGTATATCACATTGGATAAATCTGCTGGTAGTGCCTTTTATTATTACTTTGTTGAAGCTCAACAATCTAAAGAAACACTTCCCCTTCTTCTTTGGCTCAATGGAGGTCCCGGATGTTCATCTCTGGCCTATGGAGCAATGCAAGAATTGGGACCTTTTAGAGTAAACAGTGATGGCAAAACACTACACCAAAATAGATACTCATGGAACTATGCTGCAAATGTTTTGTTCGTGGAGTCACCTGTTGGAGTAGGATTTTCCTATTCAAATAAATCATCAGATTATGATATCAATGGAGACAAGAGAACAGCTACACTTAACTATTTATTTTTGGTAAATTGGTTGGAAAGATTTCCAGAATATAAAAATAGAGATTTCTATATTTCTGGAGAAAGTTATGCTGGACATTATGTTCCTCAACTTGCACATACCATACTCTATCATAACAAAAAGGCAAAGACAATCATTAACCTCAAAGGAATCTTGATAGGGAATGCAGTAATCAATGATGACACAGACTCACCAGGAATGTATGACTTTCTTGCAAGTCATGCTATCATCTCAGACAAAGCAGCTTATGATATCAACAAAAATATTTGTGATTTCACATCAAATAATCTCACAGATGAATGCAATGCTGTTGCTGATGAAGTTACTGCGGATATTGCATTCATTGATTTATATAACATTTATGCCCCAGTATGCAAAAATGGAAATATCACATCCAAGCCCAAAAAATACACTATTGTCAATGATCCATGTGGTGAGTTTTATGTGTATGCTTATCTTAATAGACAAGATGTTCAAGAAGCACTTCATGCTAATGTCACCAAACTCAAATATGAATGGAGTCCTTGCAGTAGTGTCATTAGACACTGGGTTGATAGTGCTTCAACAGTCCTTCCCCTTTTACATGAACTTCTCAATAATGGCCTAAGGGTTTGGATTTTCAGTGGTGATACAGATGGAAGGGTTCCTGTTACTTCAACTAAGTATTCAATTAAGAAGATGAACCTTCCTGTTAAAAAGATTTGGCACCCTTGGCTTGCCTATGGAGAGGTTGGGGGCTATACAGAAGTATACAAGGGAGACCTAACATTTGCTACAGTGAGAGAAGCAGGACATCAAGTGCCAAGTTACCAACCAGCAAGAGCTCTTACTTTGATTAAACATTTCTTAGATGGCACTCCTCTTCCTGCTCCTAAATTAAAAGACTAG 1488 0.3622 MSKAISSSLLISFLIFSYFVIEINGNKQVKALDNLHKEKYRVNSQIDKSEFEVQDIVYEEAIVHSQEGLKEKDRIKRLPGQPFVKFSQFGGYITLDKSAGSAFYYYFVEAQQSKETLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLHQNRYSWNYAANVLFVESPVGVGFSYSNKSSDYDINGDKRTATLNYLFLVNWLERFPEYKNRDFYISGESYAGHYVPQLAHTILYHNKKAKTIINLKGILIGNAVINDDTDSPGMYDFLASHAIISDKAAYDINKNICDFTSNNLTDECNAVADEVTADIAFIDLYNIYAPVCKNGNITSKPKKYTIVNDPCGEFYVYAYLNRQDVQEALHANVTKLKYEWSPCSSVIRHWVDSASTVLPLLHELLNNGLRVWIFSGDTDGRVPVTSTKYSIKKMNLPVKKIWHPWLAYGEVGGYTEVYKGDLTFATVREAGHQVPSYQPARALTLIKHFLDGTPLPAPKLKD 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01073 495 Gene3D - 344 380 - -
Trre7g01073 495 Pfam Serine carboxypeptidase 80 485 IPR001563 GO:0004185|GO:0006508
Trre7g01073 495 Gene3D - 390 485 - -
Trre7g01073 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Trre7g01073 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Trre7g01073 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Trre7g01073 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Trre7g01073 495 Gene3D alpha/beta hydrolase 69 327 IPR029058 -
Trre7g01073 495 FunFam Carboxypeptidase 69 327 - -
Trre7g01073 495 SUPERFAMILY alpha/beta-Hydrolases 71 489 IPR029058 -
Trre7g01073 495 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Trre7g01073 495 FunFam Carboxypeptidase 390 485 - -
Trre7g01073 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 74 472 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01073 Trre-Chr7 7162029 7166206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01073 352 488 Calmodulin-binding Proteins AT2G22960 32.117 1.02e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01073 K16297 - gmx:100783864 756.518