Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01050 ATGGATAATAATTTTCTTTCACAAGCTACAACTATAGCACTAGTAACTATTGTTTTAGTGCTTCTATACAACATATGGAGGATAAAAAAACCTAGTAACAAATCTAAGGGCATGAAACCACCAGAACCATCATATGCCTTACCTTTAATAGGTCACCTCCATCTACTAGGAAACCAAATCCCCCTAGCAAGAATCTTTGCTTCTTTTTCAGACAAATATGGTCCAATTTTCCAAATCTATTTAGGAGCATACCCTGCCCTTATTATTTCAAACCAAGAAGCAATCAAAGAATGTTTCACAATAAATGACAAAATCTTAGCTTCAAGACCAAAGTCAAGTCATGGAATCTACCTTGGTTATAACTATGCTGGCTTTGGTTTTGCATCTTATGGCACATATTGGAGTAAGCTAAGAAAATTAACCATGCTTGAATTACTCTCGTCTCGTCGCATAGAATCGTTGAGACATGTTTACGAATCGGAGATCGACACTTTGATTAAGGATCTATTTTTGTATGTTAAGGTTGGAAAAGTTAAGGTTGTGATTAGTGAATGGTTGGAAAGGTTAACATTTAATATAATGACAAAGATGATTTGTGGGAAAAGGTATTTTGAGTATTTACAAGATGTGGATGATGTAGAAGCACATGGTAATATTGTGAAACTTATAAAAGAATTTATGCATATTTCTGGTGAGTTTGTTCCTAAGGATTTGATTCCAATTCTTGGTTGGTTTGGTTTTGAAGGACAAGTTCTTAAATCTATGAAAAGAATTGCTAAAGATTTGGATACAGTTGTTGGAAGTTGGGTTGAAGAACATGTTGAGAATGATTCAAATGAGAAACATGATTTTATTGATGTGATGCTTTCTGTGATTGAAGATGATCCTGCTTCTGGTCATAATCGTGATACTATCATCAAGGCAAATGTTATGAATCTTATGCTAGCTGGCTCGGACACAACATCAACGACAATGACATGGATCCTAGCCATATTGTTGAATAATATGAATGCTTTAAAGCATGCACAAAGAGAAATTGACCATCAGATAGGCAAGGACAGAAGGGTAGAATCGTCAGACACAAAAAACTTAGTTTATTTACAAGCGATTTTCAAAGAAACATTGAGGTTATATCCACCAGGCCCATTATTAGTACCTCATGAAGGTACCGAAGATTGTTACATTCAAGGCTATTATGTTCCGAAAGGGACACGTGTGTTCGCCAATGTGTGGAAATTACATAGAGATCCAACTATTTGGTCAGAGCCTGAAAAGTTTTTTCCAGAGAGATTTATTAATGAGAATGGAGAAATTGATCATGAAAGTCATCATTTTGAGTACCTTCCTTTTGGATTAGGGAGAAGAGCTTGTCCCGGGTCTATGTTTGCTACACAAGTTAGTCTCGTTACACTTGCTCGTTTACTTCATGGATTTGATTTCGAATTGGCAATGGATGAAGCTGTTGATATGAGAGAAGGATTGGGTATAACCTTGCCTAAATTAACTCCATTGCAAGTTGTTTTGACCCCACGATTAACCTATGAACTCTATCAATGA 1557 0.3584 MDNNFLSQATTIALVTIVLVLLYNIWRIKKPSNKSKGMKPPEPSYALPLIGHLHLLGNQIPLARIFASFSDKYGPIFQIYLGAYPALIISNQEAIKECFTINDKILASRPKSSHGIYLGYNYAGFGFASYGTYWSKLRKLTMLELLSSRRIESLRHVYESEIDTLIKDLFLYVKVGKVKVVISEWLERLTFNIMTKMICGKRYFEYLQDVDDVEAHGNIVKLIKEFMHISGEFVPKDLIPILGWFGFEGQVLKSMKRIAKDLDTVVGSWVEEHVENDSNEKHDFIDVMLSVIEDDPASGHNRDTIIKANVMNLMLAGSDTTSTTMTWILAILLNNMNALKHAQREIDHQIGKDRRVESSDTKNLVYLQAIFKETLRLYPPGPLLVPHEGTEDCYIQGYYVPKGTRVFANVWKLHRDPTIWSEPEKFFPERFINENGEIDHESHHFEYLPFGLGRRACPGSMFATQVSLVTLARLLHGFDFELAMDEAVDMREGLGITLPKLTPLQVVLTPRLTYELYQ 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01050 518 Pfam Cytochrome P450 41 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01050 518 Gene3D Cytochrome P450 25 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01050 518 PANTHER CYTOCHROME P450 82C3-RELATED 16 517 - -
Trre7g01050 518 SUPERFAMILY Cytochrome P450 40 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01050 518 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01050 518 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01050 518 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01050 518 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01050 518 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01050 518 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01050 518 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01050 518 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01050 518 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01050 518 FunFam Cytochrome P450 82C4 30 509 - -
Trre7g01050 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Trre7g01050 518 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01050 518 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01050 518 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01050 Trre-Chr7 6999895 7002199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01050 41 517 Cytochrome P450 AT4G31940 47.379 4.94e-157 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01050 - - gmx:100790675 775.007